Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69806 | Canola | extracellular | 83.62 | 84.51 |
| Bra013923.1-P | Field mustard | extracellular | 83.62 | 84.51 |
| CDY50186 | Canola | extracellular | 82.93 | 83.22 |
| Bra019141.1-P | Field mustard | extracellular | 82.93 | 83.22 |
| CDX92733 | Canola | extracellular | 82.58 | 82.87 |
| AT5G57540.1 | Thale cress | extracellular | 79.44 | 80.28 |
| AT5G57530.1 | Thale cress | extracellular | 78.75 | 79.3 |
| GSMUA_Achr4P02240_001 | Banana | cytosol, mitochondrion, nucleus | 46.34 | 68.91 |
| GSMUA_Achr10P... | Banana | cytosol | 47.74 | 68.84 |
| GSMUA_Achr3P05220_001 | Banana | cytosol | 47.74 | 65.87 |
| GSMUA_Achr9P13820_001 | Banana | cytosol | 47.39 | 65.07 |
| GSMUA_Achr7P16430_001 | Banana | cytosol | 46.69 | 62.91 |
| GSMUA_Achr5P21880_001 | Banana | cytosol | 46.69 | 62.91 |
| AT5G57550.1 | Thale cress | extracellular | 60.98 | 61.62 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 59.58 | 61.51 |
| AT4G30270.1 | Thale cress | extracellular | 56.45 | 60.22 |
| HORVU7Hr1G098320.3 | Barley | vacuole | 60.63 | 60.21 |
| TraesCS7D01G419300.1 | Wheat | extracellular | 60.63 | 60.0 |
| AT4G25810.1 | Thale cress | extracellular | 59.58 | 59.79 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 59.58 | 59.79 |
| HORVU0Hr1G022110.1 | Barley | extracellular, vacuole | 60.63 | 59.59 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 59.93 | 59.52 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 59.23 | 59.44 |
| TraesCS7D01G418700.1 | Wheat | cytosol, mitochondrion, nucleus | 45.99 | 59.19 |
| AT5G57560.1 | Thale cress | extracellular | 58.54 | 59.15 |
| TraesCS7D01G419200.1 | Wheat | extracellular | 58.88 | 59.09 |
| TraesCS7D01G419100.1 | Wheat | extracellular | 59.23 | 59.03 |
| Os06t0697000-02 | Rice | extracellular | 59.58 | 58.97 |
| GSMUA_Achr3P05200_001 | Banana | cytosol, plastid, vacuole | 40.42 | 58.88 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 59.23 | 58.82 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 61.67 | 58.8 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 58.54 | 58.74 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 59.23 | 58.62 |
| HORVU7Hr1G098260.1 | Barley | vacuole | 59.58 | 58.56 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 59.23 | 58.22 |
| AT4G14130.1 | Thale cress | extracellular | 58.54 | 58.13 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 58.54 | 58.13 |
| PGSC0003DMT400048242 | Potato | extracellular | 56.45 | 58.06 |
| TraesCS7D01G419900.1 | Wheat | extracellular | 57.84 | 57.84 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 56.79 | 57.8 |
| HORVU7Hr1G098440.2 | Barley | extracellular | 57.49 | 57.69 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 57.49 | 57.09 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 57.49 | 56.9 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 57.49 | 56.7 |
| Os06t0696400-01 | Rice | extracellular | 57.84 | 56.66 |
| EER88885 | Sorghum | extracellular | 57.49 | 56.51 |
| Zm00001d014617_P001 | Maize | extracellular | 58.54 | 56.38 |
| Zm00001d014613_P001 | Maize | plasma membrane | 56.45 | 55.86 |
| Zm00001d009309_P001 | Maize | extracellular, vacuole | 52.61 | 54.51 |
| TraesCS7D01G418600.1 | Wheat | vacuole | 59.23 | 53.29 |
| AT2G18800.1 | Thale cress | extracellular | 55.05 | 51.8 |
| AT4G28850.1 | Thale cress | extracellular | 47.39 | 46.58 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 45.99 | 45.05 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 45.64 | 44.71 |
| AT2G06850.1 | Thale cress | extracellular | 45.99 | 44.59 |
| AT5G65730.1 | Thale cress | extracellular | 44.6 | 43.84 |
| HORVU7Hr1G098280.1 | Barley | extracellular, mitochondrion, vacuole | 59.93 | 43.0 |
| AT4G03210.1 | Thale cress | extracellular | 42.86 | 42.41 |
| AT2G14620.1 | Thale cress | vacuole | 42.86 | 41.14 |
| AT1G11545.1 | Thale cress | extracellular | 43.21 | 40.66 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:828687 | UniProt:A0A178UTG4 | ProteinID:AEE85118.1 | EMBL:AF093672 |
| ArrayExpress:AT4G25820 | EnsemblPlantsGene:AT4G25820 | RefSeq:AT4G25820 | TAIR:AT4G25820 | RefSeq:AT4G25820-TAIR-G | EnsemblPlants:AT4G25820.1 |
| TAIR:AT4G25820.1 | EMBL:AY093183 | Unigene:At.2902 | EMBL:BT003385 | ProteinID:CAB39603.1 | ProteinID:CAB79437.1 |
| InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
| GO:GO:0071555 | InterPro:IPR000757 | RefSeq:NP_194312.1 | ProteinID:OAO97158.1 | PFAM:PF00722 | PFAM:PF06955 |
| PIRSF:PIRSF005604 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0009005 | PO:PO:0020031 | ScanProsite:PS01034 |
| PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF20 | UniProt:Q9ZSU4 | SUPFAM:SSF49899 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000000BFEA | InterPro:XET_C | InterPro:XTH | Symbol:XTR9 | SEG:seg |
Description
XTH14Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UTG4]
Coordinates
chr4:+:13130291..13131860
Molecular Weight (calculated)
32741.8 Da
IEP (calculated)
8.541
GRAVY (calculated)
-0.343
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MACFATKQPL LLSLLLAIGF FVVAASAGNF YESFDITWGN GRANIFENGQ LLTCTLDKVS GSGFQSKKEY LFGKIDMKLK LVAGNSAGTV TAYYLSSKGT
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.