Factsheet for TraesCS7D01G418700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	69.06	79.79
GSMUA_Achr3P05220_001	Banana	cytosol	72.65	77.88
GSMUA_Achr10P...	Banana	cytosol	68.61	76.88
GSMUA_Achr7P16430_001	Banana	cytosol	72.2	75.59
GSMUA_Achr9P13820_001	Banana	cytosol	69.51	74.16
TraesCS7B01G327200.1	Wheat	extracellular	94.62	73.78
GSMUA_Achr5P21880_001	Banana	cytosol	70.4	73.71
HORVU7Hr1G098320.3	Barley	vacuole	95.52	73.7
TraesCS7D01G419200.1	Wheat	extracellular	93.72	73.08
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	95.52	72.95
TraesCS7D01G419100.1	Wheat	extracellular	94.17	72.92
TraesCS7D01G419300.1	Wheat	extracellular	94.17	72.41
TraesCS7B01G327000.1	Wheat	extracellular	94.62	72.26
Os06t0697000-02	Rice	extracellular	91.03	70.0
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	59.64	67.51
TraesCS7D01G418600.1	Wheat	vacuole	94.62	66.14
Zm00001d014617_P001	Maize	extracellular	85.2	63.76
EER90303	Sorghum	extracellular, golgi, vacuole	85.2	63.12
TraesCS7D01G419900.1	Wheat	extracellular	71.75	55.75
TraesCS2D01G045100.1	Wheat	cytosol	51.57	53.99
AT5G57550.1	Thale cress	extracellular	67.71	53.17
CDY02738	Canola	extracellular, nucleus, vacuole	51.12	53.02
VIT_11s0052g01230.t01	Wine grape	cytosol	64.57	51.8
Bra020434.1-P	Field mustard	extracellular	65.47	51.23
Bra002722.1-P	Field mustard	extracellular	63.68	50.0
CDY67778	Canola	extracellular	63.23	49.65
CDY25904	Canola	extracellular	63.23	49.65
PGSC0003DMT400048242	Potato	extracellular	61.44	49.1
Solyc07g006870.2.1	Tomato	extracellular, vacuole	61.44	48.58
Bra020436.1-P	Field mustard	extracellular	60.99	48.06
CDY67488	Canola	extracellular	60.99	48.06
CDY11863	Canola	extracellular	61.44	47.9
CDY67779	Canola	extracellular	61.44	47.9
Bra002723.1-P	Field mustard	extracellular	61.44	47.9
CDX88627	Canola	extracellular	60.99	47.55
AT5G57540.1	Thale cress	extracellular	60.54	47.54
AT5G57530.1	Thale cress	extracellular	60.54	47.37
Bra013923.1-P	Field mustard	extracellular	59.19	46.48
CDY69806	Canola	extracellular	59.19	46.48
AT4G25820.1	Thale cress	extracellular	59.19	45.99
CDY50186	Canola	extracellular	57.85	45.1
CDX92733	Canola	extracellular	57.85	45.1
Bra019141.1-P	Field mustard	extracellular	57.85	45.1
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	56.05	44.64
TraesCS7D01G419400.1	Wheat	vacuole	57.4	44.6
Bra006814.1-P	Field mustard	extracellular	60.54	42.32
TraesCS4D01G142800.1	Wheat	extracellular	55.61	42.18
TraesCS2D01G498800.1	Wheat	vacuole	51.12	39.45
TraesCS2D01G498400.1	Wheat	extracellular	51.12	39.45
TraesCS6D01G318500.1	Wheat	extracellular	52.02	39.32
TraesCS2D01G432100.1	Wheat	vacuole	53.36	39.27
PGSC0003DMT400048240	Potato	golgi	60.09	39.18
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	50.67	39.1
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	50.67	39.1
TraesCS2D01G498500.2	Wheat	vacuole	50.67	39.1
Solyc07g006850.1.1	Tomato	golgi	59.64	38.89
TraesCS2D01G086800.1	Wheat	extracellular	49.33	38.87
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	52.91	38.82
TraesCS7D01G339400.1	Wheat	extracellular	50.22	38.75
TraesCS2D01G431600.1	Wheat	vacuole	50.67	37.92
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	48.88	36.82
TraesCS2D01G224300.1	Wheat	extracellular	49.78	36.51
TraesCS2D01G431500.1	Wheat	extracellular	49.78	35.35

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722
PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101	SUPFAM:SSF49899
EnsemblPlantsGene:TraesCS7D01G418700	EnsemblPlants:TraesCS7D01G418700.1	InterPro:XET_C	TIGR:cd02176	:	:

Description

No Description!

Coordinates

chr7D:-:538332077..538333368

Molecular Weight (calculated)

25044.3 Da

IEP (calculated)

6.231

GRAVY (calculated)

-0.536

Length

223 amino acids

Sequence
(BLAST)

001: MQLKLVPGNS AGTVTAYYLS SQGPTHDEID FEFLGNVTGE PYTLHTNVFT QGQGQREQQF HLWFDPTNDF HTYSILWNPK HIIFMVDDMP IRDFKNLEGK
101: GIAFPKNQPM RLYSSLWNAD DWATQGGRVK TDWSHAPFSA SYRGFKADAC VVTAGGQPRC GASVGTDAAP GTGSSATSGE WYNQELDLTR QQRMRWVQSN
201: YMIYNYCTDP KRVAMGVPAE CSM

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.