Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G426100.1 | Wheat | vacuole | 96.85 | 95.85 |
| TraesCS7D01G419100.1 | Wheat | extracellular | 96.15 | 95.49 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 96.15 | 94.83 |
| TraesCS7D01G419300.1 | Wheat | extracellular | 95.8 | 94.48 |
| TraesCS7D01G418700.1 | Wheat | cytosol, mitochondrion, nucleus | 73.08 | 93.72 |
| TraesCS7D01G418600.1 | Wheat | vacuole | 95.1 | 85.27 |
| Os06t0697000-02 | Rice | extracellular | 85.31 | 84.14 |
| GSMUA_Achr4P02240_001 | Banana | cytosol, mitochondrion, nucleus | 53.5 | 79.27 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 82.87 | 78.74 |
| Zm00001d014617_P001 | Maize | extracellular | 81.82 | 78.52 |
| GSMUA_Achr3P05220_001 | Banana | cytosol | 56.64 | 77.88 |
| GSMUA_Achr10P... | Banana | cytosol | 53.15 | 76.38 |
| GSMUA_Achr7P16430_001 | Banana | cytosol | 56.64 | 76.06 |
| GSMUA_Achr9P13820_001 | Banana | cytosol | 54.55 | 74.64 |
| GSMUA_Achr5P21880_001 | Banana | cytosol | 55.24 | 74.18 |
| HORVU7Hr1G098280.1 | Barley | extracellular, mitochondrion, vacuole | 95.45 | 68.25 |
| TraesCS7D01G419900.1 | Wheat | extracellular | 67.83 | 67.6 |
| GSMUA_Achr3P05200_001 | Banana | cytosol, plastid, vacuole | 46.15 | 67.01 |
| AT5G57550.1 | Thale cress | extracellular | 66.08 | 66.55 |
| Bra020434.1-P | Field mustard | extracellular | 65.38 | 65.61 |
| Bra002722.1-P | Field mustard | extracellular | 62.94 | 63.38 |
| CDY67778 | Canola | extracellular | 62.94 | 63.38 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 61.54 | 63.31 |
| CDY25904 | Canola | extracellular | 62.59 | 63.03 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 60.84 | 61.7 |
| PGSC0003DMT400048242 | Potato | extracellular | 60.14 | 61.65 |
| CDY02738 | Canola | extracellular, nucleus, vacuole | 45.8 | 60.93 |
| CDY67779 | Canola | extracellular | 60.84 | 60.84 |
| Bra002723.1-P | Field mustard | extracellular | 60.84 | 60.84 |
| CDY67488 | Canola | extracellular | 60.14 | 60.78 |
| CDY11863 | Canola | extracellular | 60.49 | 60.49 |
| Bra020436.1-P | Field mustard | extracellular | 59.79 | 60.42 |
| AT5G57530.1 | Thale cress | extracellular | 59.79 | 60.0 |
| AT5G57540.1 | Thale cress | extracellular | 59.44 | 59.86 |
| CDX88627 | Canola | extracellular | 59.79 | 59.79 |
| AT4G25820.1 | Thale cress | extracellular | 59.09 | 58.88 |
| Bra013923.1-P | Field mustard | extracellular | 58.39 | 58.8 |
| CDY69806 | Canola | extracellular | 58.39 | 58.8 |
| TraesCS7D01G419400.1 | Wheat | vacuole | 58.04 | 57.84 |
| Bra019141.1-P | Field mustard | extracellular | 57.69 | 57.69 |
| CDY50186 | Canola | extracellular | 57.69 | 57.69 |
| CDX92733 | Canola | extracellular | 57.34 | 57.34 |
| TraesCS2D01G045100.1 | Wheat | cytosol | 40.56 | 54.46 |
| Bra006814.1-P | Field mustard | extracellular | 59.09 | 52.98 |
| TraesCS2D01G431800.1 | Wheat | endoplasmic reticulum, extracellular | 51.05 | 52.14 |
| Solyc07g006850.1.1 | Tomato | golgi | 59.09 | 49.42 |
| PGSC0003DMT400048240 | Potato | golgi | 58.74 | 49.12 |
| TraesCS4D01G142800.1 | Wheat | extracellular | 49.65 | 48.3 |
| TraesCS2D01G432100.1 | Wheat | vacuole | 51.05 | 48.18 |
| TraesCS6D01G318500.1 | Wheat | extracellular | 48.25 | 46.78 |
| TraesCS7D01G419600.1 | Wheat | extracellular, vacuole | 48.95 | 46.05 |
| TraesCS2D01G498400.1 | Wheat | extracellular | 45.8 | 45.33 |
| TraesCS2D01G498500.2 | Wheat | vacuole | 45.45 | 44.98 |
| TraesCS2D01G431600.1 | Wheat | vacuole | 46.85 | 44.97 |
| TraesCS2D01G498800.1 | Wheat | vacuole | 45.1 | 44.64 |
| TraesCS2D01G498700.1 | Wheat | extracellular, vacuole | 45.1 | 44.64 |
| TraesCS2D01G498600.1 | Wheat | extracellular, vacuole | 45.1 | 44.64 |
| TraesCS2D01G086800.1 | Wheat | extracellular | 44.06 | 44.52 |
| TraesCS7D01G339400.1 | Wheat | extracellular | 44.41 | 43.94 |
| TraesCS2D01G431700.1 | Wheat | extracellular, vacuole | 45.1 | 43.58 |
| TraesCS2D01G224300.1 | Wheat | extracellular | 46.15 | 43.42 |
| TraesCS2D01G431500.1 | Wheat | extracellular | 47.2 | 42.99 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 |
| GO:GO:0048046 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF101 | SUPFAM:SSF49899 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS7D01G419200 | EnsemblPlants:TraesCS7D01G419200.1 | InterPro:XET_C | InterPro:XTH | TIGR:cd02176 | : |
Description
No Description!
Coordinates
chr7D:+:538602652..538603730
Molecular Weight (calculated)
31856.6 Da
IEP (calculated)
6.779
GRAVY (calculated)
-0.334
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSVLAILL ASCALAVASF DKEFDITWGD GRGKILNNGQ VLTLGLDKVS GSGFQSKHEY LFGKIDMQLK LVPGNSAGTV TAYYLSSQGP THDEIDFEFL
101: GNVTGEPYTL HTNVFTQGQG QREQQFRLWF DATNDFHTYS ILWNPKHIIF MVDDMPIRDF KNLEGKGIAF PKNQPMRLYS SLWNADDWAT QGGRVKTDWS
201: HAPFSASYRG FKADACVVTA AGRPRCGSSV GTEVAPGTGA AGEWYNQELD LTRQQRMRWV QSNYMIYNYC TDPKRVAKGL PAECSM
101: GNVTGEPYTL HTNVFTQGQG QREQQFRLWF DATNDFHTYS ILWNPKHIIF MVDDMPIRDF KNLEGKGIAF PKNQPMRLYS SLWNADDWAT QGGRVKTDWS
201: HAPFSASYRG FKADACVVTA AGRPRCGSSV GTEVAPGTGA AGEWYNQELD LTRQQRMRWV QSNYMIYNYC TDPKRVAKGL PAECSM
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.