Factsheet for TraesCS6D01G318500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G368300.1	Wheat	extracellular	96.95	96.95
TraesCS6A01G337600.1	Wheat	extracellular	96.95	96.95
Os08t0237800-00	Rice	extracellular, vacuole	71.53	69.64
KXG24787	Sorghum	vacuole	63.39	63.82
EES13577	Sorghum	extracellular	60.34	62.24
Zm00001d024378_P001	Maize	extracellular	56.95	58.54
TraesCS2D01G431600.1	Wheat	vacuole	57.29	56.71
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	56.27	56.08
TraesCS2D01G045100.1	Wheat	cytosol	40.34	55.87
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	39.32	52.02
TraesCS2D01G432100.1	Wheat	vacuole	51.19	49.84
TraesCS7D01G419300.1	Wheat	extracellular	48.14	48.97
TraesCS7D01G419100.1	Wheat	extracellular	47.46	48.61
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	46.1	48.57
TraesCS7D01G419200.1	Wheat	extracellular	46.78	48.25
TraesCS7D01G419900.1	Wheat	extracellular	46.44	47.74
TraesCS7D01G419400.1	Wheat	vacuole	45.08	46.34
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	45.42	44.08
TraesCS7D01G418600.1	Wheat	vacuole	46.78	43.26
TraesCS2D01G498500.2	Wheat	vacuole	40.0	40.83
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	40.0	40.83
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	40.0	40.83
TraesCS7D01G339400.1	Wheat	extracellular	39.66	40.48
TraesCS2D01G498400.1	Wheat	extracellular	39.66	40.48
TraesCS2D01G086800.1	Wheat	extracellular	38.31	39.93
TraesCS2D01G498800.1	Wheat	vacuole	37.97	38.75
TraesCS4D01G142800.1	Wheat	extracellular	37.97	38.1
TraesCS2D01G431500.1	Wheat	extracellular	39.66	37.26
TraesCS2D01G224300.1	Wheat	extracellular	36.95	35.86

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF58	SUPFAM:SSF49899	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G318500	EnsemblPlants:TraesCS6D01G318500.1	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

No Description!

Coordinates

chr6D:+:426983867..426984875

Molecular Weight (calculated)

33888.7 Da

IEP (calculated)

4.516

GRAVY (calculated)

-0.315

Length

295 amino acids

Sequence
(BLAST)

001: MASSLPSSSC WHSVLLVAML LVVVMDQMAM AYMYDDIEIV WGDDHSFFYM DDAGDDEILA LCLDQTHGSG FHSKEAFLYA RFDVDLMLVP DNSAGTVTTL
101: YLMPEDVPWD YHDEVDLEFL GNVTGEPYTL HTNIFANGVG NREEQFRLWF DPAADFHTYS IDWNPKRITI LVDGVPIRSF RNKEEHGVAF PTWQKMRLHG
201: SLWNADDWAT QGGRVKTDWS EAPFFAHYRN LRVSWCRPSP GVAWCGDEPP GSTWFDRGLD AAALRRARDA HMIYDYCKDV QRYRWSGLPK ECTVE

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.