CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0237800-00	Rice	extracellular, vacuole	67.58	65.35
EES13577	Sorghum	extracellular	63.14	64.69
TraesCS6A01G337600.1	Wheat	extracellular	64.16	63.73
TraesCS6D01G318500.1	Wheat	extracellular	63.82	63.39
TraesCS6B01G368300.1	Wheat	extracellular	63.82	63.39
EES11382	Sorghum	extracellular, vacuole	54.61	53.69
EES12802	Sorghum	endoplasmic reticulum, extracellular	51.19	52.82
EER88885	Sorghum	extracellular	49.83	50.0
EES12801	Sorghum	extracellular	49.15	47.52
EES13579	Sorghum	vacuole	47.1	47.42
EER90302	Sorghum	extracellular	46.08	46.88
EER90303	Sorghum	extracellular, golgi, vacuole	47.1	45.85
EES13578	Sorghum	extracellular	42.66	43.55
OQU75596	Sorghum	cytosol, extracellular, plastid	22.53	40.74
EER88886	Sorghum	golgi	43.69	40.63
OQU83588	Sorghum	extracellular	40.96	39.6
EER91282	Sorghum	extracellular, vacuole	42.32	38.51
EES04926	Sorghum	extracellular, vacuole	38.57	38.31
EES11493	Sorghum	extracellular, vacuole	42.32	38.15
EER89799	Sorghum	vacuole	38.23	38.1
EES04929	Sorghum	extracellular, vacuole	37.2	37.59
KXG36371	Sorghum	extracellular	40.61	37.3

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1B6PGP3	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	EnsemblPlants:KXG24787	ProteinID:KXG24787	ProteinID:KXG24787.1	ProteinID:OQU80135.1	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF58
EnsemblPlantsGene:SORBI_3007G085500	SUPFAM:SSF49899	TMHMM:TMhelix	UniParc:UPI00081AE5E8	InterPro:XET_C	InterPro:XTH
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:10813228..10816531

Molecular Weight (calculated)

33574.1 Da

IEP (calculated)

4.528

GRAVY (calculated)

-0.425

Length

293 amino acids

Sequence
(BLAST)

001: MALSSSSCKH RMVVMAFITL AMAYSTAVVA LLYDDIEISW GQDCYFYMDG DTDTDTLALG LDHTSGSGFS SKDAYLYGRF DMDIKLVSNN SAGTVATFYL
101: TPDDVPWEYH DEVDMEFLGN ATGEPYTLHT NVYLNGVGSR EQQFHLWFDP AEDFHTYSIE WNPKYIIFLV DGTPIRVYKN DRARGVPFPT WQRMRVQGSL
201: WNADEWATQG GRVKTDWTQA PFYAYYRNFR VTPCVPSPGV AWCGDEPAQS TWFDRRLDSA ALRKVQEENM VYDYCEDQKR FKDKGLPVEC TKA

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.