CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052651_P001	Maize	extracellular	92.41	94.28
TraesCS4D01G142800.1	Wheat	extracellular	84.82	87.42
TraesCS4A01G172600.1	Wheat	unclear	84.82	87.42
TraesCSU01G175000.1	Wheat	vacuole	84.49	87.07
Os11t0539200-01	Rice	extracellular	83.17	85.42
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	83.5	83.77
GSMUA_Achr8P34300_001	Banana	cytosol	74.26	82.12
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	70.63	76.7
AT5G13870.2	Thale cress	extracellular, vacuole	71.29	73.72
CDX69621	Canola	vacuole	71.29	73.72
VIT_01s0150g00460.t01	Wine grape	extracellular	74.59	73.62
CDY69237	Canola	extracellular	71.62	73.56
CDY09832	Canola	vacuole	70.96	73.38
Bra013164.1-P	Field mustard	extracellular	71.29	73.22
CDX93096	Canola	extracellular	70.96	72.88
KRG94750	Soybean	endoplasmic reticulum	70.96	72.88
Bra006220.1-P	Field mustard	vacuole	70.3	72.7
KRH06776	Soybean	endoplasmic reticulum	70.3	72.2
KRH70105	Soybean	nucleus	72.94	71.52
CDX70524	Canola	vacuole	70.3	71.48
CDX78542	Canola	vacuole	70.3	71.48
AT2G06850.1	Thale cress	extracellular	68.98	70.61
PGSC0003DMT400005591	Potato	extracellular	67.66	69.26
Solyc11g040140.1.1	Tomato	extracellular	67.33	68.0
KRG94748	Soybean	extracellular, vacuole	57.43	67.18
KRH06775	Soybean	endoplasmic reticulum	71.29	62.61
EER88885	Sorghum	extracellular	49.51	51.37
EER90303	Sorghum	extracellular, golgi, vacuole	47.85	48.17
EER90302	Sorghum	extracellular	45.54	47.92
KXG36371	Sorghum	extracellular	46.2	43.89
EER91282	Sorghum	extracellular, vacuole	45.87	43.17
EES11493	Sorghum	extracellular, vacuole	45.87	42.77
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	62.38	42.76
EES12802	Sorghum	endoplasmic reticulum, extracellular	39.27	41.9
EES04926	Sorghum	extracellular, vacuole	40.59	41.69
OQU75596	Sorghum	cytosol, extracellular, plastid	22.11	41.36
KXG24787	Sorghum	vacuole	39.6	40.96
EER89799	Sorghum	vacuole	39.6	40.82
EES04929	Sorghum	extracellular, vacuole	38.28	40.0
EES13577	Sorghum	extracellular	37.62	39.86
EER88886	Sorghum	golgi	41.25	39.68
EES12801	Sorghum	extracellular	39.27	39.27
EES13579	Sorghum	vacuole	37.62	39.18
EES11382	Sorghum	extracellular, vacuole	37.62	38.26
EES13578	Sorghum	extracellular	35.97	37.98

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8064829	UniProt:A0A1Z5RIM2	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757
EnsemblPlants:OQU83588	ProteinID:OQU83588	ProteinID:OQU83588.1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	EnsemblPlantsGene:SORBI_3005G140001	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A86491	InterPro:XET_C	RefSeq:XP_002449625.1	InterPro:XTH
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:59525287..59527098

Molecular Weight (calculated)

34515.4 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.434

Length

303 amino acids

Sequence
(BLAST)

001: MATTTTARVP PLLVAAVAVA VAVLVEVATA AAPRKPVDVP FQKNYVPTWA QDHIHYVDGG REVQLYLDKS TGTGFQTRGS YLFGHFSMHM KLVGGDSAGT
101: VTAFYLSSQN SEHDEIDFEF LGNRTGQPYI LQTNVFTGGK GDREQRIYLW FDPTKEYHSY SVLWNLYMIA FFVDDVPIRV FKNTSSDLGV RYPFSQPMKL
201: YSSLWNADDW ATRGGREKTD WSNAPFVASY RGFHVDGCEA SAEARYCATQ GARWWDQPEF RDLDAAQYRK LADVRRRYTI YNYCTDRDRY AAMPPECARD
301: RDV

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.