CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	20.32	73.56
TraesCS7A01G427200.1	Wheat	extracellular, vacuole	66.03	70.51
HORVU7Hr1G098390.1	Barley	extracellular, vacuole	65.71	70.41
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	65.4	68.9
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	66.35	68.75
EER90302	Sorghum	extracellular	45.71	50.0
EER88885	Sorghum	extracellular	46.03	49.66
EES12802	Sorghum	endoplasmic reticulum, extracellular	44.76	49.65
EER90303	Sorghum	extracellular, golgi, vacuole	46.03	48.17
EES13579	Sorghum	vacuole	40.95	44.33
OQU75596	Sorghum	cytosol, extracellular, plastid	22.54	43.83
KXG24787	Sorghum	vacuole	40.63	43.69
EES04929	Sorghum	extracellular, vacuole	40.0	43.45
EER89799	Sorghum	vacuole	40.32	43.2
EES12801	Sorghum	extracellular	41.27	42.9
OQU83588	Sorghum	extracellular	39.68	41.25
EES04926	Sorghum	extracellular, vacuole	38.41	41.02
EES13577	Sorghum	extracellular	37.14	40.91
EES11382	Sorghum	extracellular, vacuole	38.1	40.27
EES13578	Sorghum	extracellular	36.19	39.72
KXG36371	Sorghum	extracellular	39.37	38.87
EER91282	Sorghum	extracellular, vacuole	38.73	37.89
EES11493	Sorghum	extracellular, vacuole	38.73	37.54

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8063813	InterPro:Beta_glucanase	UniProt:C5Z8T3	InterPro:ConA-like_dom_sf
EnsemblPlants:EER88886	ProteinID:EER88886	ProteinID:EER88886.1	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955
PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF50
EnsemblPlantsGene:SORBI_3010G246500	SUPFAM:SSF49899	unigene:Sbi.11326	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A89244
InterPro:XET_C	RefSeq:XP_002437519.1	InterPro:XTH	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:58620021..58622697

Molecular Weight (calculated)

35506.9 Da

IEP (calculated)

8.933

GRAVY (calculated)

-0.351

Length

315 amino acids

Sequence
(BLAST)

001: MRVSGGRLRR LLAVTVVLSV ALSLATAAAG GGEHNFRRDF DVVWGAGNAR FRDGGRTVEL SLDERTGARL QSKQRYLFGK FDLEMKLVPG ESAGTITSFY
101: ICTGGARHDE VDFEFLGNAS GEPYLLHTNI FSDGRGEREQ QFALWFDPTR GFHTYTILWN PHSIILYVDG VPIRVFANNA AAGVPFPARQ PVRVFASIWD
201: AEDWATQGGR VRTDWNRAPF VATYRRYNVT NACVWEDEED GGGGNGGRVR CPTTAVAGSG RRRRAAAWMA QRMDWWSWMT LSWVRMNYMV YDYCADRRRF
301: PHEFPPECAI PIGRS

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.