Factsheet for TraesCS7D01G419600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G427200.1	Wheat	extracellular, vacuole	94.41	97.29
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	94.41	95.99
HORVU7Hr1G098390.1	Barley	extracellular, vacuole	91.12	94.22
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	19.74	68.97
EER88886	Sorghum	golgi	68.75	66.35
TraesCS2D01G045100.1	Wheat	cytosol	38.49	54.93
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	38.82	52.91
TraesCS7D01G419400.1	Wheat	vacuole	48.36	51.22
TraesCS7D01G419200.1	Wheat	extracellular	46.05	48.95
TraesCS7D01G419900.1	Wheat	extracellular	46.05	48.78
TraesCS7D01G419300.1	Wheat	extracellular	46.05	48.28
TraesCS7D01G419100.1	Wheat	extracellular	45.07	47.57
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	42.43	46.07
TraesCS6D01G318500.1	Wheat	extracellular	44.08	45.42
TraesCS7D01G418600.1	Wheat	vacuole	45.39	43.26
TraesCS2D01G431600.1	Wheat	vacuole	42.11	42.95
TraesCS2D01G431500.1	Wheat	extracellular	44.08	42.68
TraesCS2D01G432100.1	Wheat	vacuole	42.43	42.57
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	41.45	42.57
TraesCS2D01G086800.1	Wheat	extracellular	39.14	42.05
TraesCS7D01G339400.1	Wheat	extracellular	39.47	41.52
TraesCS4D01G142800.1	Wheat	extracellular	40.13	41.5
TraesCS2D01G498400.1	Wheat	extracellular	39.14	41.18
TraesCS2D01G498500.2	Wheat	vacuole	38.82	40.83
TraesCS2D01G498800.1	Wheat	vacuole	38.49	40.48
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	38.49	40.48
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	38.49	40.48
TraesCS2D01G224300.1	Wheat	extracellular	39.8	39.8

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF50	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G419600
EnsemblPlants:TraesCS7D01G419600.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg	:

Description

No Description!

Coordinates

chr7D:-:538894621..538896609

Molecular Weight (calculated)

34269.3 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.205

Length

304 amino acids

Sequence
(BLAST)

001: MLSGSLWRLL AVAVAVTLAV GATGAAAAVE AGRSRSLHRD FDAVWGKRNA RFFDDGRVVE LALDRETGSR LESKDRYLFG RFDLDIRLVA GESAGTITSF
101: YICTGGARHD EVDFEFLGNV SGEPYILHTN IFSDGKGERE QQFVLWFDPT ADFHTYSILW NPLNIILYID GTPIRVFKNN EANGVPFPTR QPVHVFASIW
201: NAEEWATQGG RVKTDWSEAP FVAAYRRFDA TSACVWQGGA SPARCGGDHL PSSASSWMAQ RLDWWSWMTL NWVRMNYMTY DYCADRKRYP HAFPTECIIP
301: IGRI

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.