Factsheet for TraesCS2D01G045100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	98.59	72.16
TraesCS2A01G047200.1	Wheat	vacuole	98.12	72.07
TraesCS2B01G059000.1	Wheat	vacuole	94.37	69.07
EES13579	Sorghum	vacuole	72.77	53.26
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	78.87	52.66
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	53.99	51.57
Zm00001d024392_P001	Maize	mitochondrion	73.24	49.52
TraesCS2D01G432100.1	Wheat	vacuole	61.5	43.23
TraesCS7D01G419200.1	Wheat	extracellular	54.46	40.56
TraesCS6D01G318500.1	Wheat	extracellular	55.87	40.34
TraesCS7D01G419100.1	Wheat	extracellular	53.99	39.93
TraesCS7D01G419900.1	Wheat	extracellular	53.52	39.72
TraesCS7D01G419300.1	Wheat	extracellular	53.99	39.66
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	52.11	39.64
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	54.93	39.53
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	54.93	38.49
TraesCS2D01G431600.1	Wheat	vacuole	53.05	37.92
TraesCS7D01G419400.1	Wheat	vacuole	50.7	37.63
TraesCS7D01G418600.1	Wheat	vacuole	54.46	36.36
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	47.89	35.29
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	47.89	35.29
TraesCS2D01G498500.2	Wheat	vacuole	47.42	34.95
TraesCS2D01G498400.1	Wheat	extracellular	47.42	34.95
TraesCS2D01G498800.1	Wheat	vacuole	46.48	34.26
TraesCS7D01G339400.1	Wheat	extracellular	46.48	34.26
TraesCS4D01G142800.1	Wheat	extracellular	46.01	33.33
TraesCS2D01G086800.1	Wheat	extracellular	44.13	33.22
TraesCS2D01G224300.1	Wheat	extracellular	46.48	32.57
TraesCS2D01G431500.1	Wheat	extracellular	45.07	30.57

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722
PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF46	SUPFAM:SSF49899
EnsemblPlantsGene:TraesCS2D01G045100	EnsemblPlants:TraesCS2D01G045100.1	InterPro:XET_C	:	:	:

Description

No Description!

Coordinates

chr2D:+:16486691..16487734

Molecular Weight (calculated)

24764.0 Da

IEP (calculated)

6.024

GRAVY (calculated)

-0.714

Length

213 amino acids

Sequence
(BLAST)

001: MDIKLVPRDS AGTITTLYML TEGPWEEHDE VDLEFLGNSS GEPYTLHTNI YARGRGGREK QYRLWFDPTQ DFHTYSILWN PKEILILVDG TPVRQMKNQQ
101: RKDIPFPLYQ PMRLYSSIWN AEDWATQGGR VKTDWSQAPF TSLFRNYSAV SCVSQKTAWI CGRGSSDSSW FTHVLDEVGQ RKLMEVDEKH KIYDYCVDSR
201: RYPNGYPPEC GSQ

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.