Factsheet for Zm00001d024392_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13579	Sorghum	vacuole	80.32	86.94
TraesCS2D01G045100.1	Wheat	cytosol	49.52	73.24
TraesCS2A01G047200.1	Wheat	vacuole	66.03	71.72
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	66.03	71.48
TraesCS2B01G059000.1	Wheat	vacuole	64.44	69.76
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	69.21	68.34
Zm00001d002412_P001	Maize	extracellular	52.38	55.37
Zm00001d050201_P001	Maize	extracellular	51.11	55.33
Zm00001d002410_P001	Maize	extracellular	43.49	49.46
Zm00001d026250_P001	Maize	extracellular, vacuole	42.22	48.72
Zm00001d014617_P001	Maize	extracellular	42.86	45.3
Zm00001d014613_P001	Maize	plasma membrane	41.59	45.17
Zm00001d026251_P001	Maize	extracellular	41.27	44.83
Zm00001d009309_P001	Maize	extracellular, vacuole	39.37	44.77
Zm00001d024378_P001	Maize	extracellular	38.1	41.81
Zm00001d053320_P001	Maize	vacuole	35.56	38.49
Zm00001d052651_P001	Maize	extracellular	35.24	37.37
Zm00001d046007_P001	Maize	extracellular	34.92	37.29
Zm00001d015977_P001	Maize	mitochondrion	35.56	37.21
Zm00001d014615_P002	Maize	extracellular	43.81	36.6
Zm00001d014614_P001	Maize	nucleus, plastid	43.81	36.6
Zm00001d002193_P003	Maize	extracellular, vacuole	36.19	33.83
Zm00001d021667_P001	Maize	plasma membrane	35.24	33.64

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1D6IZ08	ProteinID:AQK41105.1	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF46	SUPFAM:SSF49899	UniParc:UPI000842A4EC	InterPro:XET_C
InterPro:XTH	EnsemblPlantsGene:Zm00001d024392	EnsemblPlants:Zm00001d024392_P001	EnsemblPlants:Zm00001d024392_T001	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 21

Coordinates

chr10:-:68477775..68478941

Molecular Weight (calculated)

35980.2 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.514

Length

315 amino acids

Sequence
(BLAST)

001: MHASHSIYTH RVPARSSLPT KAGAMWQLSR AYRMASFCLI SLAAAAVSPA TGDMADTVDM MWGNTQVLYD SSSGRQTVSL SLDRWTTSAF RSKSTYLFGR
101: FDVDIKLVPR DSAGTVTTVY MVTEGPWQYH DEIDLEFLGN TTGEPYTLHT NIYARGKGDR EMQYRLWFDP TEDFNTYSII WNPHMILILV NGVPLRRMKN
201: RMRDDTPFPL FQPMRLYASI WDADEWATQG GRIKTDWSHG PFTAFFRNYT ANACVPYNRA WICGQGSGDS SWFNQELDEE GQQKLSEVNG RNKIYDYCTD
301: SRRFPSGYPP ECGSQ

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.