Factsheet for Zm00001d053320_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04929	Sorghum	extracellular, vacuole	90.38	90.69
Zm00001d015977_P001	Maize	mitochondrion	68.04	65.78
Zm00001d046007_P001	Maize	extracellular	60.14	59.32
GSMUA_Achr8P19740_001	Banana	extracellular	48.11	52.04
GSMUA_Achr7P10940_001	Banana	extracellular	47.77	50.0
GSMUA_Achr3P03390_001	Banana	extracellular	49.14	48.64
VIT_11s0016g03480.t01	Wine grape	extracellular	47.08	47.08
KRH39331	Soybean	nucleus	46.39	46.71
KRH41530	Soybean	nucleus	45.36	46.64
Solyc12g007260.1.1	Tomato	extracellular	46.74	46.58
Solyc12g007250.1.1	Tomato	extracellular	45.7	45.7
KRH76320	Soybean	nucleus	45.36	45.67
CDY35228	Canola	extracellular	45.7	45.55
CDY06861	Canola	extracellular	45.36	45.21
AT4G28850.1	Thale cress	extracellular	45.36	45.21
Solyc12g007270.1.1	Tomato	extracellular	45.36	45.05
Bra011066.1-P	Field mustard	extracellular	45.02	44.86
Zm00001d002410_P001	Maize	extracellular	41.58	43.68
Zm00001d014617_P001	Maize	extracellular	44.67	43.62
Zm00001d026250_P001	Maize	extracellular, vacuole	40.89	43.59
Zm00001d014613_P001	Maize	plasma membrane	42.96	43.1
Zm00001d009309_P001	Maize	extracellular, vacuole	40.89	42.96
Zm00001d026251_P001	Maize	extracellular	41.58	41.72
Zm00001d050201_P001	Maize	extracellular	40.89	40.89
Zm00001d002412_P001	Maize	extracellular	40.89	39.93
Zm00001d052651_P001	Maize	extracellular	38.83	38.05
Zm00001d024378_P001	Maize	extracellular	35.74	36.24
Zm00001d024392_P001	Maize	mitochondrion	38.49	35.56
Zm00001d002193_P003	Maize	extracellular, vacuole	40.21	34.72
Zm00001d014614_P001	Maize	nucleus, plastid	43.99	33.95
Zm00001d014615_P002	Maize	extracellular	43.99	33.95
Zm00001d021667_P001	Maize	plasma membrane	38.49	33.94

Protein Annotations

EntrezGene:103654693	Gene3D:2.60.120.200	MapMan:50.2.4	ProteinID:AQK59272.1	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757
UniProt:K7U9U0	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF95	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00022084FB
InterPro:XET_C	InterPro:XTH	EnsemblPlantsGene:Zm00001d053320	EnsemblPlants:Zm00001d053320_P001	EnsemblPlants:Zm00001d053320_T001	SEG:seg

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 26

Coordinates

chr4:-:225975437..225977027

Molecular Weight (calculated)

32091.7 Da

IEP (calculated)

6.639

GRAVY (calculated)

-0.226

Length

291 amino acids

Sequence
(BLAST)

001: MVRLRTMALL LVAVTAAAVA GLAAANFRDD CDIPWEPQNA RFTSDGNGLS MALVSNSSGC MLRTKKQYVY GTVSTLIQLV PGNSAGTVTT YYASSVGDNH
101: DEIDFEFLGN VSGQPYTFHT NIYANGVGNK EIQFKPWFDP TTGYHNYTIS WSPCMIVWYV DSVPIRVFRN YQQSYGVAYP TSRPMHAYSS IWAAEDWATQ
201: GGRVKTDWSK APFVANYRNI HLDICDCPGG YACSTNCAAA AAPNSGACQL SPEQRGLMQS LQKDYAIYDY CVDSKRWVNG VKPTECGLPQ Y

Best Arabidopsis Sequence Match ( AT4G28850.1 )
(BLAST)

001: MAGLQAKTLM FVLAAALATL GRTFVEADFS KNFIVTWGKD HMFMNGTNLR LVLDKSAGSA IKSKVAHLFG SVEMLIKLVP GNSAGTVAAY YLSSTGSTHD
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF

Arabidopsis Description

XTH26Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVV2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.