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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH76320 Soybean nucleus 78.8 77.16
KRH39331 Soybean nucleus 78.45 76.82
VIT_11s0016g03480.t01 Wine grape extracellular 75.62 73.54
Solyc12g007260.1.1 Tomato extracellular 63.6 61.64
AT4G28850.1 Thale cress extracellular 61.13 59.25
Solyc12g007250.1.1 Tomato extracellular 60.07 58.42
Bra011066.1-P Field mustard extracellular 60.07 58.22
CDY06861 Canola extracellular 59.72 57.88
CDY35228 Canola extracellular 59.72 57.88
GSMUA_Achr8P19740_001 Banana extracellular 53.71 56.51
KRH02889 Soybean extracellular 56.89 55.33
GSMUA_Achr7P10940_001 Banana extracellular 54.06 55.04
KRH19006 Soybean vacuole 56.89 54.95
KRH19136 Soybean nucleus 54.77 54.77
KRH19002 Soybean extracellular 55.12 54.74
KRH02894 Soybean endoplasmic reticulum, extracellular 55.83 54.11
KRH19005 Soybean vacuole 54.42 54.04
GSMUA_Achr3P03390_001 Banana extracellular 55.83 53.74
KRH02890 Soybean extracellular 53.71 53.33
KRH02893 Soybean extracellular 53.71 53.33
KRH19003 Soybean extracellular 54.06 53.31
KRH02892 Soybean extracellular 54.06 53.31
KRH37378 Soybean nucleus 49.82 53.01
KRH31558 Soybean nucleus 51.59 52.9
KRH02895 Soybean cytosol 54.42 52.56
KRG97361 Soybean nucleus 50.53 51.25
KRH58823 Soybean extracellular, nucleus 50.18 50.18
KRH42721 Soybean extracellular, nucleus 49.82 49.82
KRH59064 Soybean extracellular 50.53 48.31
KRH42944 Soybean extracellular 50.18 48.3
KRH58172 Soybean extracellular, vacuole 49.12 47.77
TraesCS7A01G331200.1 Wheat vacuole 47.7 47.37
KRH04364 Soybean extracellular 48.76 47.26
TraesCS7B01G242900.1 Wheat extracellular, vacuole 47.0 46.02
TraesCS2D01G498400.1 Wheat extracellular 47.0 46.02
TraesCS7D01G339400.1 Wheat extracellular 46.64 45.67
KRH77174 Soybean extracellular 47.7 45.61
EES04929 Sorghum extracellular, vacuole 46.64 45.52
KRH06776 Soybean endoplasmic reticulum 47.35 45.42
Zm00001d053320_P001 Maize vacuole 46.64 45.36
TraesCS2A01G498200.1 Wheat extracellular 46.29 45.33
KRH28311 Soybean extracellular, vacuole 47.35 45.12
KRG94750 Soybean endoplasmic reticulum 47.0 45.08
TraesCS2D01G498700.1 Wheat extracellular, vacuole 45.94 44.98
TraesCS2D01G498600.1 Wheat extracellular, vacuole 45.94 44.98
TraesCS2B01G526500.1 Wheat vacuole 45.94 44.98
TraesCS2D01G498500.2 Wheat vacuole 45.58 44.64
TraesCS2A01G498400.1 Wheat vacuole 45.58 44.64
TraesCS2A01G498300.1 Wheat vacuole 45.58 44.64
EER89799 Sorghum vacuole 46.29 44.56
KRH22496 Soybean extracellular 45.58 44.48
EES04926 Sorghum extracellular, vacuole 46.29 44.41
KRH12375 Soybean extracellular 49.47 44.3
Zm00001d046007_P001 Maize extracellular 45.94 44.07
HORVU2Hr1G111060.1 Barley vacuole 39.22 44.05
TraesCS2D01G498800.1 Wheat vacuole 44.88 43.94
TraesCS2B01G104700.1 Wheat extracellular 44.17 43.86
Zm00001d015977_P001 Maize mitochondrion 46.64 43.85
OQU75596 Sorghum cytosol, extracellular, plastid 25.09 43.83
KRG98913 Soybean vacuole 44.52 43.75
TraesCS2D01G086800.1 Wheat extracellular 43.46 43.46
KRH26853 Soybean vacuole 45.23 43.24
TraesCS2A01G498500.1 Wheat vacuole 44.52 43.15
TraesCS2B01G526600.1 Wheat extracellular 44.52 43.15
KRH73676 Soybean extracellular 43.11 43.11
KRH70105 Soybean nucleus 47.0 43.04
TraesCS2A01G089000.1 Wheat extracellular 43.11 42.96
KRH14468 Soybean extracellular 43.11 42.36
KRH25426 Soybean extracellular 44.52 42.28
KRH35625 Soybean vacuole 44.17 42.23
KRG91154 Soybean extracellular 43.82 41.89
KRH56088 Soybean vacuole 43.82 41.75
HORVU7Hr1G081740.1 Barley extracellular, vacuole 47.7 41.54
KRG94748 Soybean extracellular, vacuole 37.1 40.54
HORVU2Hr1G014530.3 Barley extracellular 44.52 40.38
KRH06775 Soybean endoplasmic reticulum 47.35 38.84
KRG91233 Soybean extracellular 40.99 38.54
KRH35587 Soybean extracellular 40.64 38.08
HORVU2Hr1G111030.2 Barley vacuole 41.34 35.56
Protein Annotations
EntrezGene:102664743Gene3D:2.60.120.200MapMan:50.2.4EMBL:ACUP02004770InterPro:Beta_glucanaseInterPro:ConA-like_dom_sf
InterPro:GH16InterPro:GH16_ASEnsemblPlantsGene:GLYMA_08G035900GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0005975GO:GO:0006073
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411GO:GO:0016043GO:GO:0016740
GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312GO:GO:0042546GO:GO:0048046
GO:GO:0071555UniProt:I1KPZ2InterPro:IPR000757EnsemblPlants:KRH41530ProteinID:KRH41530ProteinID:KRH41530.1
PFAM:PF00722PFAM:PF06955PIRSF:PIRSF005604PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762
PANTHER:PTHR31062PANTHER:PTHR31062:SF55SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI00023C5ECCInterPro:XET_C
InterPro:XTH:::::
Description
hypothetical protein
Coordinates
chr8:-:2833542..2835123
Molecular Weight (calculated)
32324.1 Da
IEP (calculated)
9.247
GRAVY (calculated)
-0.393
Length
283 amino acids
Sequence
(BLAST)
001: MWVALLIFAL APNIIQVDAN ISKSMHLTWG VRHASILGED LHLVLDKTSG SAAQSKRSFL FGSIEMLIKL VPGNSAGTVT AYYLSSAGSQ HDEIDFEFLG
101: NSTGQPYTVH TNIYTQGKGS REQQFFLWFD PTADFHNYTI HWNPTAIVWY VDSVPIRVFR NHEKEGIAYP NKQGMRVYTT LWNADDWATR GGLVKTDWHS
201: APFTARFHHF RARACKSGGA RSTNQCASNV PANWWTSRRY KQLSHSQIGQ LNWVRNNYMI YDYCTDTKRF NGQIPPECFK PQF
Best Arabidopsis Sequence Match ( AT4G28850.1 )
(BLAST)
001: MAGLQAKTLM FVLAAALATL GRTFVEADFS KNFIVTWGKD HMFMNGTNLR LVLDKSAGSA IKSKVAHLFG SVEMLIKLVP GNSAGTVAAY YLSSTGSTHD
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF
Arabidopsis Description
XTH26Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVV2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.