Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G339400.1 | Wheat | extracellular | 96.19 | 96.19 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 93.08 | 94.39 |
| HORVU7Hr1G081740.1 | Barley | extracellular, vacuole | 94.12 | 83.69 |
| Zm00001d046007_P001 | Maize | extracellular | 69.2 | 67.8 |
| EER89799 | Sorghum | vacuole | 68.51 | 67.35 |
| TraesCS2B01G526500.1 | Wheat | vacuole | 65.05 | 65.05 |
| TraesCS2B01G104700.1 | Wheat | extracellular | 61.94 | 62.81 |
| OQU75596 | Sorghum | cytosol, extracellular, plastid | 34.26 | 61.11 |
| TraesCS2B01G526600.1 | Wheat | extracellular | 61.59 | 60.96 |
| GSMUA_Achr8P19740_001 | Banana | extracellular | 48.79 | 52.42 |
| GSMUA_Achr7P10940_001 | Banana | extracellular | 49.13 | 51.08 |
| GSMUA_Achr3P03390_001 | Banana | extracellular | 51.56 | 50.68 |
| CDY35228 | Canola | extracellular | 49.48 | 48.97 |
| Bra011066.1-P | Field mustard | extracellular | 48.79 | 48.29 |
| AT4G28850.1 | Thale cress | extracellular | 48.79 | 48.29 |
| CDY06861 | Canola | extracellular | 48.79 | 48.29 |
| KRH39331 | Soybean | nucleus | 47.75 | 47.75 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 47.4 | 47.08 |
| KRH41530 | Soybean | nucleus | 46.02 | 47.0 |
| KRH76320 | Soybean | nucleus | 46.37 | 46.37 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 46.02 | 46.02 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 45.33 | 45.8 |
| Solyc12g007270.1.1 | Tomato | extracellular | 46.37 | 45.73 |
| Solyc12g007260.1.1 | Tomato | extracellular | 45.67 | 45.21 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 45.33 | 44.86 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 44.98 | 44.83 |
| TraesCS7B01G327400.1 | Wheat | extracellular | 43.94 | 44.56 |
| Solyc12g007250.1.1 | Tomato | extracellular | 43.6 | 43.3 |
| TraesCS2B01G454800.1 | Wheat | extracellular | 40.48 | 41.79 |
| TraesCS2B01G059000.1 | Wheat | vacuole | 41.52 | 41.24 |
| TraesCS2B01G244500.1 | Wheat | extracellular | 43.25 | 40.85 |
| TraesCS6B01G368300.1 | Wheat | extracellular | 40.48 | 39.66 |
| TraesCS2B01G455400.1 | Wheat | extracellular | 41.52 | 39.6 |
| TraesCS2B01G454600.1 | Wheat | vacuole | 40.83 | 39.6 |
| TraesCS7B01G327500.1 | Wheat | extracellular, vacuole | 40.83 | 39.46 |
| TraesCS7B01G364300.1 | Wheat | extracellular | 38.75 | 39.44 |
| TraesCS2B01G454500.1 | Wheat | extracellular | 40.48 | 37.62 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
| InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF49 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS7B01G242900 | EnsemblPlants:TraesCS7B01G242900.1 |
| InterPro:XET_C | InterPro:XTH | TIGR:cd02176 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7B:+:451147500..451148729
Molecular Weight (calculated)
32073.9 Da
IEP (calculated)
4.855
GRAVY (calculated)
-0.253
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMSMRALLA VVAFAAVLRL GRVSANFADL CDITWEPQNA AMTDGGEHLT LSLVSNISGS MLRTKKTFIY GSISTLIKLV KGNSAGTVTT YYTSSVGDDH
101: DEIDFEFLGN ETGQPYTIHT NVFADGVGAK EVQFYPWFDP TDDFHNYTIL WNPSMIVWFV DSIPIRVFRN YASKGVPFPT KRPMYGFSSI WSADDWATQG
201: GRVKTDWTKA PFVAEYNNMG LDVCECSGAD AECAARCNKD TPPEPSQLTK EQMRKLRAVQ LGYTIYDYCA KARDGGKGPV PPECDMEQY
101: DEIDFEFLGN ETGQPYTIHT NVFADGVGAK EVQFYPWFDP TDDFHNYTIL WNPSMIVWFV DSIPIRVFRN YASKGVPFPT KRPMYGFSSI WSADDWATQG
201: GRVKTDWTKA PFVAEYNNMG LDVCECSGAD AECAARCNKD TPPEPSQLTK EQMRKLRAVQ LGYTIYDYCA KARDGGKGPV PPECDMEQY
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.