Factsheet for GSMUA_Achr3P03390_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19740_001	Banana	extracellular	61.56	67.29
VIT_11s0016g03480.t01	Wine grape	extracellular	62.59	63.23
GSMUA_Achr7P10940_001	Banana	extracellular	59.52	62.95
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	40.48	61.66
GSMUA_Achr10P...	Banana	cytosol	41.5	61.31
GSMUA_Achr3P05220_001	Banana	cytosol	42.86	60.58
GSMUA_Achr5P21880_001	Banana	cytosol	43.54	60.09
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	42.52	59.24
KRH39331	Soybean	nucleus	57.82	58.82
KRH76320	Soybean	nucleus	57.48	58.48
GSMUA_Achr9P13820_001	Banana	cytosol	41.5	58.37
Solyc12g007270.1.1	Tomato	extracellular	58.16	58.36
Solyc12g007260.1.1	Tomato	extracellular	57.48	57.88
GSMUA_Achr7P16430_001	Banana	cytosol	41.84	57.75
Solyc12g007250.1.1	Tomato	extracellular	55.78	56.36
KRH41530	Soybean	nucleus	53.74	55.83
AT4G28850.1	Thale cress	extracellular	54.42	54.79
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	36.39	54.31
CDY35228	Canola	extracellular	53.4	53.77
Bra011066.1-P	Field mustard	extracellular	53.06	53.42
CDY06861	Canola	extracellular	53.06	53.42
TraesCS7A01G331200.1	Wheat	vacuole	51.02	52.63
TraesCS7B01G242900.1	Wheat	extracellular, vacuole	50.68	51.56
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	48.64	50.89
TraesCS7D01G339400.1	Wheat	extracellular	50.0	50.87
GSMUA_Achr10P...	Banana	extracellular	48.64	50.71
EES04929	Sorghum	extracellular, vacuole	50.0	50.69
TraesCS2B01G104700.1	Wheat	extracellular	48.3	49.82
EER89799	Sorghum	vacuole	49.66	49.66
TraesCS2A01G089000.1	Wheat	extracellular	47.96	49.65
Zm00001d046007_P001	Maize	extracellular	49.66	49.49
TraesCS2D01G086800.1	Wheat	extracellular	47.62	49.47
GSMUA_Achr6P30850_001	Banana	extracellular	47.28	49.29
Zm00001d053320_P001	Maize	vacuole	48.64	49.14
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	47.96	48.79
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	47.96	48.79
GSMUA_Achr10P...	Banana	extracellular	47.62	48.61
TraesCS2B01G526500.1	Wheat	vacuole	47.62	48.44
TraesCS2D01G498800.1	Wheat	vacuole	47.28	48.1
TraesCS2D01G498500.2	Wheat	vacuole	47.28	48.1
TraesCS2D01G498400.1	Wheat	extracellular	47.28	48.1
TraesCS2A01G498200.1	Wheat	extracellular	47.28	48.1
TraesCS2A01G498300.1	Wheat	vacuole	47.28	48.1
TraesCS2A01G498400.1	Wheat	vacuole	47.28	48.1
OQU75596	Sorghum	cytosol, extracellular, plastid	26.19	47.53
TraesCS2A01G498500.1	Wheat	vacuole	46.26	46.58
HORVU2Hr1G014530.3	Barley	extracellular	49.32	46.47
HORVU7Hr1G081740.1	Barley	extracellular, vacuole	51.36	46.46
HORVU2Hr1G111060.1	Barley	vacuole	39.8	46.43
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	42.52	46.3
TraesCS2B01G526600.1	Wheat	extracellular	45.92	46.23
EES04926	Sorghum	extracellular, vacuole	46.26	46.1
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	41.84	46.07
Zm00001d015977_P001	Maize	mitochondrion	46.94	45.85
GSMUA_Achr1P14290_001	Banana	vacuole	44.9	44.59
GSMUA_Achr8P26470_001	Banana	extracellular	42.86	44.06
GSMUA_Achr8P05120_001	Banana	extracellular	42.18	43.36
GSMUA_Achr3P26220_001	Banana	extracellular	42.18	43.36
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	42.86	42.71
GSMUA_Achr8P34300_001	Banana	cytosol	39.8	42.7
GSMUA_Achr5P19320_001	Banana	vacuole	41.16	42.61
GSMUA_Achr1P08500_001	Banana	extracellular	38.78	42.07
HORVU2Hr1G111030.2	Barley	vacuole	43.2	38.6
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	37.07	24.66

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr3G03390_001	EnsemblPlants:GSMUA_Achr3P03390_001
EnsemblPlants:GSMUA_Achr3T03390_001	InterPro:IPR000757	UniProt:M0SBF7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF55	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295E517	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:GMGC_GENE;Acc:GSMUA_Achr3G03390_001]

Coordinates

chr3:-:2203944..2205070

Molecular Weight (calculated)

33355.8 Da

IEP (calculated)

4.358

GRAVY (calculated)

-0.282

Length

294 amino acids

Sequence
(BLAST)

001: MASLHAVVVV VAASLLLMAA FDGALVHADF YNDVDFVWGY QNAGIWNDGN SLSLMLDNVS GCGMVTKNQY LFGSIEVQIK LVKGNSAGTV TAYYLSSTGD
101: KHDEIDFEFL GNETGQPYII HTNIFTQGVG NREEQFYPWF DPSDDFHNYT IHWNPSQVVW FVDGIPIRVF RNYESSGVPF PNRQAMRAYS SIWEADEWAT
201: RGGLVKIDWN SAPFVAYYQY LQLRACPWYG PSSSGECSAA SPANWWTSPE YSTLTYQEQG QMKWARDNFM IYDYCKDTER FDGAMPPECS LPKY

Best Arabidopsis Sequence Match ( AT4G28850.1 )
(BLAST)

001: MAGLQAKTLM FVLAAALATL GRTFVEADFS KNFIVTWGKD HMFMNGTNLR LVLDKSAGSA IKSKVAHLFG SVEMLIKLVP GNSAGTVAAY YLSSTGSTHD
101: EIDFEFLGNA TGQPYTIHTN LYAQGKGNRE QQFRPWFNPT NGFHNYTIHW NPSEVVWFVD GTPIRVFRNY ESEGIAYPNK QGMKVFASLW NAEDWATQGG
201: RVKTNWTLAP FVAEGRRYKA RACLWKGSVS IKQCVDPTIR SNWWTSPSFS QLTASQLTKM QKIRDGFMIY DYCKDTNRFK GVMPPECSKK QF

Arabidopsis Description

XTH26Probable xyloglucan endotransglucosylase/hydrolase protein 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVV2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.