Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G111060.1 | Barley | vacuole | 68.09 | 88.89 |
| TraesCS2D01G498500.2 | Wheat | vacuole | 75.38 | 85.81 |
| TraesCS2A01G498200.1 | Wheat | extracellular | 74.47 | 84.78 |
| TraesCS2A01G498300.1 | Wheat | vacuole | 74.47 | 84.78 |
| TraesCS2A01G498400.1 | Wheat | vacuole | 74.47 | 84.78 |
| TraesCS2B01G526500.1 | Wheat | vacuole | 74.47 | 84.78 |
| TraesCS2D01G498600.1 | Wheat | extracellular, vacuole | 74.16 | 84.43 |
| TraesCS2D01G498700.1 | Wheat | extracellular, vacuole | 74.16 | 84.43 |
| TraesCS2D01G498400.1 | Wheat | extracellular | 73.86 | 84.08 |
| TraesCS2D01G498800.1 | Wheat | vacuole | 69.91 | 79.58 |
| TraesCS2A01G498500.1 | Wheat | vacuole | 70.21 | 79.11 |
| TraesCS2B01G526600.1 | Wheat | extracellular | 69.91 | 78.77 |
| HORVU7Hr1G081740.1 | Barley | extracellular, vacuole | 52.58 | 53.23 |
| HORVU2Hr1G014530.3 | Barley | extracellular | 48.33 | 50.96 |
| GSMUA_Achr7P10940_001 | Banana | extracellular | 38.6 | 45.68 |
| GSMUA_Achr8P19740_001 | Banana | extracellular | 36.78 | 44.98 |
| GSMUA_Achr3P03390_001 | Banana | extracellular | 38.6 | 43.2 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 37.69 | 42.61 |
| HORVU7Hr1G098320.3 | Barley | vacuole | 37.39 | 42.56 |
| HORVU0Hr1G022110.1 | Barley | extracellular, vacuole | 37.39 | 42.12 |
| HORVU7Hr1G098260.1 | Barley | vacuole | 37.08 | 41.78 |
| AT4G28850.1 | Thale cress | extracellular | 36.78 | 41.44 |
| KRH41530 | Soybean | nucleus | 35.56 | 41.34 |
| KRH39331 | Soybean | nucleus | 36.17 | 41.18 |
| KRH76320 | Soybean | nucleus | 35.87 | 40.83 |
| CDY06861 | Canola | extracellular | 36.17 | 40.75 |
| HORVU7Hr1G098370.1 | Barley | extracellular | 34.95 | 40.35 |
| HORVU7Hr1G098440.2 | Barley | extracellular | 34.95 | 40.21 |
| Bra011066.1-P | Field mustard | extracellular | 35.56 | 40.07 |
| Solyc12g007260.1.1 | Tomato | extracellular | 35.56 | 40.07 |
| Solyc12g007250.1.1 | Tomato | extracellular | 35.26 | 39.86 |
| CDY35228 | Canola | extracellular | 35.26 | 39.73 |
| Solyc12g007270.1.1 | Tomato | extracellular | 35.26 | 39.59 |
| HORVU7Hr1G098390.1 | Barley | extracellular, vacuole | 32.83 | 36.73 |
| HORVU7Hr1G106530.2 | Barley | extracellular | 31.31 | 35.89 |
| HORVU2Hr1G101160.1 | Barley | extracellular, vacuole | 32.22 | 35.69 |
| HORVU4Hr1G028720.1 | Barley | extracellular, vacuole | 32.52 | 35.43 |
| HORVU7Hr1G098280.1 | Barley | extracellular, mitochondrion, vacuole | 37.08 | 30.5 |
| HORVU2Hr1G045330.4 | Barley | extracellular, vacuole | 32.52 | 28.84 |
| HORVU2Hr1G101150.1 | Barley | vacuole | 30.09 | 27.58 |
| HORVU2Hr1G101240.3 | Barley | mitochondrion, vacuole | 25.23 | 26.1 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | UniProt:A0A287JFR7 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | EnsemblPlantsGene:HORVU2Hr1G111030 | EnsemblPlants:HORVU2Hr1G111030.2 | InterPro:IPR000757 | PFAM:PF00722 | ScanProsite:PS01034 |
| PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF49 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI000B46B829 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:721832040..721833411
Molecular Weight (calculated)
31354.6 Da
IEP (calculated)
6.748
GRAVY (calculated)
-0.167
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSGRALLL VAVAATAVGL AGASFRDNCD IKWNPENAAF SEDGHGLTMS LKSNSSGCLL QTKKQFIYGS VSTLIKLVPG NSAGTVTTYY TSSVGADHDE
101: IDFEFLGNET GQPYTLHTNV FADGVGKKEM QFVPWFDPTA DFHAYTISWT PCMIVWYVDD VPIRVFRNYR DKGIAYPIKR PMFGYSSIWS AEDWATQGGR
201: VKADWSKAPF VAGYRDMVLD VCPCDGSDSC VYGCAGAFGH GGRQQNXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXASPTSSGA RCCGCRNITG
301: STTTASTTGT TRSPAQSAAC RSTDHPAAA
101: IDFEFLGNET GQPYTLHTNV FADGVGKKEM QFVPWFDPTA DFHAYTISWT PCMIVWYVDD VPIRVFRNYR DKGIAYPIKR PMFGYSSIWS AEDWATQGGR
201: VKADWSKAPF VAGYRDMVLD VCPCDGSDSC VYGCAGAFGH GGRQQNXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXASPTSSGA RCCGCRNITG
301: STTTASTTGT TRSPAQSAAC RSTDHPAAA
001: MGPSSSLTTI VATVLLVTLF GSAYASNFFD EFDLTWGDHR GKIFNGGNML SLSLDQVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTA YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV
Arabidopsis Description
XTH15Xyloglucan endotransglucosylase/hydrolase protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q38911]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.