Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G526600.1 | Wheat | extracellular | 96.92 | 96.92 |
| TraesCS2D01G498800.1 | Wheat | vacuole | 95.89 | 96.89 |
| TraesCS2A01G498200.1 | Wheat | extracellular | 89.38 | 90.31 |
| TraesCS2A01G498400.1 | Wheat | vacuole | 88.7 | 89.62 |
| TraesCS2A01G498300.1 | Wheat | vacuole | 88.7 | 89.62 |
| HORVU2Hr1G111060.1 | Barley | vacuole | 68.49 | 79.37 |
| HORVU2Hr1G111030.2 | Barley | vacuole | 79.11 | 70.21 |
| TraesCS2A01G089000.1 | Wheat | extracellular | 60.96 | 62.68 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 60.96 | 62.46 |
| GSMUA_Achr7P10940_001 | Banana | extracellular | 47.6 | 50.0 |
| GSMUA_Achr8P19740_001 | Banana | extracellular | 44.86 | 48.7 |
| GSMUA_Achr3P03390_001 | Banana | extracellular | 46.58 | 46.26 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 45.21 | 46.15 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 44.86 | 45.8 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 45.21 | 45.67 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 44.52 | 44.98 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 44.52 | 44.67 |
| KRH41530 | Soybean | nucleus | 43.15 | 44.52 |
| AT4G28850.1 | Thale cress | extracellular | 44.52 | 44.52 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 44.18 | 44.48 |
| KRH39331 | Soybean | nucleus | 43.84 | 44.29 |
| KRH76320 | Soybean | nucleus | 43.49 | 43.94 |
| Solyc12g007250.1.1 | Tomato | extracellular | 43.49 | 43.64 |
| Solyc12g007260.1.1 | Tomato | extracellular | 43.49 | 43.49 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 42.81 | 43.25 |
| TraesCS7A01G427100.1 | Wheat | extracellular | 42.12 | 43.16 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 42.12 | 43.16 |
| Bra011066.1-P | Field mustard | extracellular | 42.47 | 42.47 |
| CDY35228 | Canola | extracellular | 42.47 | 42.47 |
| CDY06861 | Canola | extracellular | 42.47 | 42.47 |
| Solyc12g007270.1.1 | Tomato | extracellular | 42.47 | 42.32 |
| TraesCS2A01G433800.1 | Wheat | endoplasmic reticulum, extracellular | 39.38 | 41.07 |
| TraesCS4A01G172600.1 | Wheat | unclear | 41.1 | 40.82 |
| TraesCS2A01G433700.1 | Wheat | vacuole | 40.75 | 40.2 |
| TraesCS7A01G463800.1 | Wheat | extracellular | 39.04 | 40.0 |
| TraesCS2A01G433600.1 | Wheat | vacuole | 40.41 | 39.86 |
| TraesCS7A01G427200.1 | Wheat | extracellular, vacuole | 39.73 | 39.32 |
| TraesCS2A01G047200.1 | Wheat | vacuole | 38.36 | 38.62 |
| TraesCS2A01G047100.1 | Wheat | endoplasmic reticulum, extracellular | 38.36 | 38.49 |
| TraesCS2A01G434300.1 | Wheat | extracellular | 38.7 | 37.29 |
| TraesCS6A01G337600.1 | Wheat | extracellular | 37.33 | 36.95 |
| TraesCS2A01G433500.1 | Wheat | mitochondrion | 38.01 | 33.13 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0042546 | InterPro:IPR000757 |
| PFAM:PF00722 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF49 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G498500 | EnsemblPlants:TraesCS2A01G498500.1 | InterPro:XTH |
| TIGR:cd02176 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:728752256..728753370
Molecular Weight (calculated)
32588.3 Da
IEP (calculated)
6.343
GRAVY (calculated)
-0.403
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMDISSRAV LLVAVAAAAT IGLAGASFRD NCDIKWNAEN AAFSDDGHGL TMSLKSNTSG CLLQTKQQFI YGSVSTRIKL VPGNSAGTVT TYYTSSVGKD
101: HDEIDFEFLG NETGKPYTLH TNVFADGVGK KEMQFVPWFD PTTDYHTYTI SWTPCMIVWY VDDVPIRVFR NYRDKGIAYP IKRPMFGYSS IWSAEDWCTQ
201: GGRVKADWSK APFVASYRDM VLDVCPCDGS DSCVYGCEGA FGHGGQQQNC AGLSDQQRTK MLEKQKYNRI YDYCVDYKDN KKPGPECSLP QY
101: HDEIDFEFLG NETGKPYTLH TNVFADGVGK KEMQFVPWFD PTTDYHTYTI SWTPCMIVWY VDDVPIRVFR NYRDKGIAYP IKRPMFGYSS IWSAEDWCTQ
201: GGRVKADWSK APFVASYRDM VLDVCPCDGS DSCVYGCEGA FGHGGQQQNC AGLSDQQRTK MLEKQKYNRI YDYCVDYKDN KKPGPECSLP QY
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.