Factsheet for TraesCS2A01G433500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G454500.1	Wheat	extracellular	89.85	96.78
TraesCS2D01G431500.1	Wheat	extracellular	90.15	96.18
HORVU2Hr1G101150.1	Barley	vacuole	70.15	65.46
Os04t0604900-01	Rice	extracellular, vacuole	57.01	59.5
TraesCS7A01G426900.1	Wheat	extracellular	42.09	49.3
TraesCS7A01G426700.1	Wheat	extracellular	42.09	48.79
TraesCS7A01G426100.1	Wheat	vacuole	42.09	48.79
TraesCS7A01G426600.1	Wheat	vacuole	42.09	48.62
TraesCS7A01G427600.1	Wheat	extracellular	41.79	48.44
TraesCS7A01G427000.1	Wheat	extracellular	41.19	48.25
TraesCS7A01G427100.1	Wheat	extracellular	40.6	47.72
TraesCS7A01G427300.1	Wheat	extracellular	40.3	47.37
TraesCS7A01G427200.1	Wheat	extracellular, vacuole	39.4	44.75
TraesCS4A01G172600.1	Wheat	unclear	38.51	43.88
TraesCS2A01G433800.1	Wheat	endoplasmic reticulum, extracellular	34.93	41.79
TraesCS7A01G331200.1	Wheat	vacuole	34.33	40.35
TraesCS6A01G337600.1	Wheat	extracellular	35.52	40.34
TraesCS2A01G433600.1	Wheat	vacuole	35.22	39.86
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	34.33	39.52
TraesCS2A01G498400.1	Wheat	vacuole	34.03	39.45
TraesCS2A01G498300.1	Wheat	vacuole	34.03	39.45
TraesCS2A01G498200.1	Wheat	extracellular	34.03	39.45
TraesCS2A01G047200.1	Wheat	vacuole	34.03	39.31
TraesCS7A01G463800.1	Wheat	extracellular	33.13	38.95
TraesCS2A01G089000.1	Wheat	extracellular	32.54	38.38
TraesCS2A01G433700.1	Wheat	vacuole	33.73	38.18
TraesCS2A01G498500.1	Wheat	vacuole	33.13	38.01
TraesCS2A01G434300.1	Wheat	extracellular	34.03	37.62

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF53	SUPFAM:SSF49899	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G433500	EnsemblPlants:TraesCS2A01G433500.1
InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:+:686700695..686703063

Molecular Weight (calculated)

36329.5 Da

IEP (calculated)

4.500

GRAVY (calculated)

-0.149

Length

335 amino acids

Sequence
(BLAST)

001: MLAQFHPSRA NIHSQSTRTR IENMSSPLLV AMAAAAIVVA CCLAACPVGA GASAGDFYDN FVVKWGTDPD PDRRVEIVDG GRLVTLTLNN VSGAGFQSRD
101: AFLFGEFTME MKLVPGDSAG TVTTFYLTSK DPTAAGDGHD EIDFEFLGNV SGEPYLMQTN VFAQGVGGRE QRSYLWFDPT EDFHNYTILW NPLNIIFSVD
201: GVPVRVFRNH DANGVPYLSR QAMKVHATIW DGDTWATRGG RVKIDWAHAP FVASYGTYAS SACVSAAGNG DQDGAPSAFC CPGDASSWMA RRLGPDGERA
301: VAWARDTYMV MDYCDDPWNL GRPAECDMDQ LASAV

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.