Factsheet for Os04t0604900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G454500.1	Wheat	extracellular	59.81	61.74
TraesCS2D01G431500.1	Wheat	extracellular	59.5	60.83
TraesCS2A01G433500.1	Wheat	mitochondrion	59.5	57.01
Os06t0696400-01	Rice	extracellular	47.04	51.54
Os06t0696600-01	Rice	extracellular	44.55	49.65
Os06t0697000-02	Rice	extracellular	44.55	49.31
Os04t0604300-01	Rice	extracellular	42.99	49.29
Os04t0604800-00	Rice	extracellular	41.74	45.58
HORVU2Hr1G101150.1	Barley	vacuole	49.84	44.57
Os11t0539200-01	Rice	extracellular	40.81	44.41
Os04t0604200-01	Rice	extracellular	39.88	43.69
Os08t0237800-00	Rice	extracellular, vacuole	39.88	42.24
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	10.9	40.23
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	37.69	37.93
Os08t0240500-00	Rice	extracellular	26.48	37.12

Protein Annotations

Gene3D:2.60.120.200	EntrezGene:4336908	MapMan:50.2.4	EMBL:AK059203	ProteinID:BAF15705.1	ProteinID:BAS90878.1
ProteinID:CAE03877.1	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os04g0604900	EnsemblPlants:Os04t0604900-01	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51257	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF53	UniProt:Q7XNY6	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00001B1A59
InterPro:XET_C	RefSeq:XP_015634186.1	InterPro:XTH	SEG:seg	:	:

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 16Similar to Xyloglucan endotransglycosylase (Fragment). (Os04t0604900-01)

Coordinates

chr4:-:30520357..30523556

Molecular Weight (calculated)

34796.4 Da

IEP (calculated)

4.607

GRAVY (calculated)

-0.245

Length

321 amino acids

Sequence
(BLAST)

001: MARPLGQQQV GAAAALVIVV ACCVVAGCSG ARGRGFREEF DVIWGEDHVR VTDEDDAATR QVVALTLDQA SGSGFQSKDQ FLFGEFSMEM KLVPGESPGT
101: VATFYLTSEG DAHDEIDFEF LGNVSGEPYV MHTNVFAQGR GNREQQFYLW FDPTADFHNY TILWNPLNII FSVDGKAVRV FKNHEAAGVP YPSGQAMRVH
201: ASLWNGDFWA TRGGQVKINW TAAPFVASYR TYAYSACAVP AAGGGGGGPC TSGQLPNSTS SPSTCDCGGA WMDRQLGADG ERDVAWARAN YMIYDYCGDQ
301: WRFPQGLPAE CSLDQSSGHR T

Best Arabidopsis Sequence Match ( AT5G57540.1 )
(BLAST)

001: MAAFTTKQSL LLLSLLLLIS LSAGSFYDNF DITWGNGRAN IVESGQLLTC TLDKISGSGF QSKKEYLFGK IDMKMKLVAG NSAGTVTAYY LSSKGETWDE
101: IDFEFLGNVT GQPYVLHTNV FTGGKGNREM QFYLWFDPTA DFHTYTVLWN PLNIIFLVDG IPIRVFKNNE ANGVAYPKSQ PMKIYSSLWE ADDWATQGGK
201: VKTDWTNAPF SASYKSFNDV DCCSRTSLLN WVTCNANSNS WMWTTLNSNQ YGQMKWVQDD YMIYNYCTDF KRFPQGLPTE CNLN

Arabidopsis Description

XTH13Putative xyloglucan endotransglucosylase/hydrolase protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKL8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.