Factsheet for Os08t0237800-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
mitochondrion 1
vacuole 4
extracellular 5
endoplasmic reticulum 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G368300.1	Wheat	extracellular	70.3	72.2
TraesCS6D01G318500.1	Wheat	extracellular	69.64	71.53
TraesCS6A01G337600.1	Wheat	extracellular	68.65	70.51
EES13577	Sorghum	extracellular	65.02	68.88
KXG24787	Sorghum	vacuole	65.35	67.58
Zm00001d024378_P001	Maize	extracellular	61.06	64.46
Os04t0604800-00	Rice	extracellular	56.44	58.16
Os04t0604300-01	Rice	extracellular	49.84	53.93
Os04t0604200-01	Rice	extracellular	47.85	49.49
Os06t0697000-02	Rice	extracellular	45.87	47.93
Os06t0696600-01	Rice	extracellular	45.54	47.92
Os06t0696400-01	Rice	extracellular	45.87	47.44
Os08t0240500-00	Rice	extracellular	32.67	43.23
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	44.55	42.32
Os04t0604900-01	Rice	extracellular, vacuole	42.24	39.88
Os11t0539200-01	Rice	extracellular	37.95	38.98
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	9.9	34.48

Protein Annotations

Gene3D:2.60.120.200	EntrezGene:4345022	MapMan:50.2.4	UniProt:A0A0P0XDI5	ProteinID:BAT04473.1	InterPro:Beta_glucanase
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os08g0237800	EnsemblPlants:Os08t0237800-00
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF58	SUPFAM:SSF49899	TMHMM:TMhelix	UniParc:UPI000393C54C	InterPro:XET_C
RefSeq:XP_015649469.1	InterPro:XTH	SEG:seg	:	:	:

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 8Similar to Xyloglucan endotransglycosylase (Fragment). (Os08t0237800-00)

Coordinates

chr8:-:8384563..8385805

Molecular Weight (calculated)

33983.7 Da

IEP (calculated)

4.430

GRAVY (calculated)

-0.215

Length

303 amino acids

Sequence
(BLAST)

001: MAMPCSGERC RRVWWSAAAA VVAFFFVVFV AAAAAAATAS MYDDVEVVWG GDHSFFFMDG DGDALALCLD ETHGSGFRSR DAYLYARFDV DMMLVANNSA
101: GTVTTLYLMP DDVPWEYHDE VDLEFLGNVT GEPYTLHTNI FANGVGGREQ QFRLWFDPTA DFHTYSIVWN PKHIIILVDG VPIRDYRNTA ARGGPAFPTW
201: QKMRAHGSLW NADDWATQGG RVKTDWSEAP FFAYYRGLRV TPCAPSPGVA WCGDEPPESP WFDQQEMDAA ALSKARQEHL LYDYCEDTKR FKDTGLPVEC
301: TIN

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.