Factsheet for TraesCS6B01G368300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G318500.1	Wheat	extracellular	96.95	96.95
TraesCS6A01G337600.1	Wheat	extracellular	95.59	95.59
Os08t0237800-00	Rice	extracellular, vacuole	72.2	70.3
KXG24787	Sorghum	vacuole	63.39	63.82
EES13577	Sorghum	extracellular	61.36	63.29
Zm00001d024378_P001	Maize	extracellular	57.63	59.23
TraesCS2B01G454600.1	Wheat	vacuole	56.61	56.04
TraesCS2B01G455400.1	Wheat	extracellular	51.19	49.84
TraesCS7B01G326900.1	Wheat	extracellular	48.47	49.48
TraesCS2B01G454800.1	Wheat	extracellular	46.78	49.29
TraesCS2B01G059000.1	Wheat	vacuole	48.14	48.8
TraesCS7B01G327200.1	Wheat	extracellular	47.12	48.6
TraesCS7B01G327000.1	Wheat	extracellular	47.8	48.29
TraesCS7B01G327700.1	Wheat	extracellular	47.46	48.28
TraesCS7B01G327400.1	Wheat	extracellular	45.76	47.37
TraesCS7B01G364300.1	Wheat	extracellular	43.39	45.07
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	45.08	44.48
TraesCS7B01G242900.1	Wheat	extracellular, vacuole	39.66	40.48
TraesCS2B01G526500.1	Wheat	vacuole	39.66	40.48
TraesCS2B01G104700.1	Wheat	extracellular	38.98	40.35
TraesCS2B01G454500.1	Wheat	extracellular	41.02	38.91
TraesCS2B01G526600.1	Wheat	extracellular	37.29	37.67
TraesCS2B01G244500.1	Wheat	extracellular	37.29	35.95

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF58	SUPFAM:SSF49899	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G368300	EnsemblPlants:TraesCS6B01G368300.1	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

No Description!

Coordinates

chr6B:+:642724111..642725089

Molecular Weight (calculated)

34006.8 Da

IEP (calculated)

4.474

GRAVY (calculated)

-0.349

Length

295 amino acids

Sequence
(BLAST)

001: MASSLPSSSC WHSIVLVAML LVLVMDQMAM AYMYDDIEIV WGDDHSFFYM DDAGDDEVLA LCLDQTHGSG FHSKEAYLYA RFDVDLMLVP DNSAGTVTTL
101: YLMPEDVPWD YHDEVDLEFL GNVTGEPYTL HTNIFANGVG NREEQFRLWF DPTADFHTYS IDWNPKRITI LVDGVPIRSF RNKEEHGVAF PTWQKMRLHG
201: SLWNADDWAT QGGRVKTDWS EAPFFAHYRN LRVSWCRPSP GLAWCGDEPP ESTWFDRGLD AAALRRARDA HMIYDYCKDV QRYRWSGLPK ECTVD

Best Arabidopsis Sequence Match ( AT4G14130.1 )
(BLAST)

001: MGPSSSLTTI VATVLLVTLF GSAYASNFFD EFDLTWGDHR GKIFNGGNML SLSLDQVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTA YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV

Arabidopsis Description

XTH15Xyloglucan endotransglucosylase/hydrolase protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q38911]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.