Factsheet for TraesCS2B01G454800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	97.5	97.5
TraesCS2A01G433800.1	Wheat	endoplasmic reticulum, extracellular	95.36	95.36
Zm00001d002410_P001	Maize	extracellular	72.5	73.29
Os04t0604300-01	Rice	extracellular	73.21	73.21
Zm00001d026250_P001	Maize	extracellular, vacuole	71.07	72.89
EES12802	Sorghum	endoplasmic reticulum, extracellular	73.21	72.18
TraesCS7B01G327400.1	Wheat	extracellular	53.93	52.98
TraesCS7B01G327200.1	Wheat	extracellular	53.21	52.1
TraesCS7B01G326900.1	Wheat	extracellular	53.21	51.56
TraesCS7B01G327000.1	Wheat	extracellular	53.21	51.03
TraesCS7B01G364300.1	Wheat	extracellular	50.36	49.65
TraesCS2B01G455400.1	Wheat	extracellular	53.21	49.17
TraesCS7B01G327700.1	Wheat	extracellular	50.71	48.97
TraesCS2B01G454600.1	Wheat	vacuole	50.71	47.65
TraesCS6B01G368300.1	Wheat	extracellular	49.29	46.78
TraesCS2B01G059000.1	Wheat	vacuole	47.14	45.36
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	46.43	43.48
TraesCS7B01G242900.1	Wheat	extracellular, vacuole	41.79	40.48
TraesCS2B01G526500.1	Wheat	vacuole	41.79	40.48
TraesCS2B01G104700.1	Wheat	extracellular	41.07	40.35
TraesCS2B01G526600.1	Wheat	extracellular	40.71	39.04
TraesCS2B01G454500.1	Wheat	extracellular	40.71	36.66
TraesCS2B01G244500.1	Wheat	extracellular	37.5	34.31

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF94	SUPFAM:SSF49899	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS2B01G454800	EnsemblPlants:TraesCS2B01G454800.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg

Description

No Description!

Coordinates

chr2B:+:649669805..649670845

Molecular Weight (calculated)

30999.2 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.308

Length

280 amino acids

Sequence
(BLAST)

001: MALSSKQVHA CVVLVVLCIA ARTAAAWGRI DDGLEVNWGR GSHGTVSADG QVVSLSLDRN SGSGFRSKDT YLYARIDLQI KLAPGNSAGT VTTCYFLSEG
101: SWANHDEIDL EFLGNSTGEP YTLHTNVYIN GTGSKEQQFH LWFDPTADFH TYSIVWTPLH LLVLVDGTPI RELKNHADRG VAYPSWQRMR LYGSLWNAED
201: WATQGGRVKT DWSLAPFVAQ YRNFTATTSS PGAGGGYYDQ EMDATAQQAM KWARGTYMVY NYCADSARFP YGSPPECYMP

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.