Factsheet for TraesCS2B01G059000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G045100.1	Wheat	cytosol	69.07	94.37
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	92.78	92.78
TraesCS2A01G047200.1	Wheat	vacuole	90.72	91.03
EES13579	Sorghum	vacuole	70.1	70.1
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	75.94	69.28
Zm00001d024392_P001	Maize	mitochondrion	69.76	64.44
TraesCS7B01G364300.1	Wheat	extracellular	60.14	61.62
TraesCS2B01G455400.1	Wheat	extracellular	56.7	54.46
TraesCS7B01G327200.1	Wheat	extracellular	47.77	48.6
TraesCS6B01G368300.1	Wheat	extracellular	48.8	48.14
TraesCS7B01G326900.1	Wheat	extracellular	47.08	47.4
TraesCS7B01G327000.1	Wheat	extracellular	47.42	47.26
TraesCS2B01G454800.1	Wheat	extracellular	45.36	47.14
TraesCS2B01G454600.1	Wheat	vacuole	47.77	46.64
TraesCS7B01G327700.1	Wheat	extracellular	46.39	46.55
TraesCS7B01G327400.1	Wheat	extracellular	45.36	46.32
TraesCS7B01G327500.1	Wheat	extracellular, vacuole	46.39	45.15
TraesCS7B01G242900.1	Wheat	extracellular, vacuole	41.24	41.52
TraesCS2B01G104700.1	Wheat	extracellular	40.21	41.05
TraesCS2B01G526500.1	Wheat	vacuole	40.21	40.48
TraesCS2B01G244500.1	Wheat	extracellular	41.58	39.54
TraesCS2B01G526600.1	Wheat	extracellular	39.18	39.04
TraesCS2B01G454500.1	Wheat	extracellular	38.83	36.33

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF46	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G059000
EnsemblPlants:TraesCS2B01G059000.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	:	:

Description

No Description!

Coordinates

chr2B:+:28720116..28721610

Molecular Weight (calculated)

33478.5 Da

IEP (calculated)

5.975

GRAVY (calculated)

-0.497

Length

291 amino acids

Sequence
(BLAST)

001: MGRLARRAYL LGSLIEAFYL ILAVSPVASD MTDSLDLLWG DTKVEYDSGG RQTVSLSLDR WMTSVFRSKS KHLFGRFDMD IKLVPGDSAG TVTTLYMLTE
101: GPWEEHDEVD LEFLGNSSGE PYTLHTNIYA RGRGGREKQY RLWFDPTQDF HTYCILWNPK EILILVDGIP IRQMKNQQRK DIPFPLYQPM RLYSSIWNAE
201: DWATQGGRVK TDWSQAPFTS LFRNYSVVAC VPQKTAWICG RGSSDSSWFT HVLDEEGQRK LKEVDEKHKI YDYCVDSTRY PNGYPSECGS Q

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.