Factsheet for Os08t0240566-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
extracellular 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G045100.1	Wheat	cytosol	52.66	78.87
EES13579	Sorghum	vacuole	69.59	76.29
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	69.59	76.29
TraesCS2A01G047200.1	Wheat	vacuole	69.28	76.21
TraesCS2B01G059000.1	Wheat	vacuole	69.28	75.94
Zm00001d024392_P001	Maize	mitochondrion	68.34	69.21
Os08t0240500-00	Rice	extracellular	45.14	62.88
Os04t0604200-01	Rice	extracellular	57.05	62.12
Os04t0604300-01	Rice	extracellular	46.4	52.86
Os04t0604800-00	Rice	extracellular	44.51	48.3
Os06t0696600-01	Rice	extracellular	42.32	46.88
Os06t0697000-02	Rice	extracellular	42.01	46.21
Os06t0696400-01	Rice	extracellular	42.01	45.73
Os08t0237800-00	Rice	extracellular, vacuole	42.32	44.55
Os11t0539200-01	Rice	extracellular	36.36	39.32
Os04t0604900-01	Rice	extracellular, vacuole	37.93	37.69
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	9.72	35.63

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A0N7KPI2	ProteinID:BAT04490.1	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os08g0240566	EnsemblPlants:Os08t0240566-00	PFAM:PF00722	PFAM:PF06955
PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF46	SUPFAM:SSF49899
UniParc:UPI000393966E	InterPro:XET_C	InterPro:XTH	:	:	:

Description

Similar to OSIGBa0118P15.7 protein. (Os08t0240566-00)

Coordinates

chr8:+:8494099..8495316

Molecular Weight (calculated)

36713.3 Da

IEP (calculated)

5.355

GRAVY (calculated)

-0.450

Length

319 amino acids

Sequence
(BLAST)

001: MSLYKVYNIS TQHTPQSAYS LRHFALAKAM GQPRAQLLPS MSMAALYLIL ATSPVISDMT DSLDMLWGNT QVLYDSTGHQ IVSLSLDRWT TSAFRSKTKY
101: LFARIDMDIK LVAKDSAGTV TTLYMITEGL WDIHDEIDLE FLGNTTGEPY TLHTNIYARG TGGREKQYRL WFDPTEDFHT YTIIWNPQMI LILVDGTPIR
201: QMKNQLRNDI PFPLYQPMRL YASIWDADDW ATQGGRIKTD WSQAPFTAFF RNYQANACIP YKTAWICSQG SNDSSWFTQD LDEEGKQKLK DVDDNYKIYD
301: YCTDSRRYPN GYPPECGSQ

Best Arabidopsis Sequence Match ( AT5G48070.1 )
(BLAST)

001: MVSFCGRRFA FLIIFLFAAQ YERVYAGSFH KDVQIHWGDG RGKILDNVGN LLSLSLDKFS GSGFQSHQEF LYGKVEVQMK LVPGNSAGTV TTFYLKSPGT
101: TWDEIDFEFL GNISGHPYTL HTNVYTKGTG DKEQQFHLWF DPTVDFHTYC IIWNPQRVIF TIDGIPIREF KNSEALGVPF PKHQPMRLYA SLWEAEHWAT
201: RGGLEKTDWS KAPFTAFYRN YNVDACVWSN GKSSCSANSS WFTQVLDFKG KNRVKWAQRK YMVYNYCTDK KRFPQGAPPE CS

Arabidopsis Description

XTH20Xyloglucan endotransglucosylase/hydrolase protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI31]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.