Factsheet for Os06t0696600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 7
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G327400.1	Wheat	extracellular	79.51	80.35
TraesCS7A01G427100.1	Wheat	extracellular	79.17	80.0
HORVU7Hr1G098370.1	Barley	extracellular	79.17	80.0
TraesCS7A01G427300.1	Wheat	extracellular	78.47	79.3
TraesCS7D01G419400.1	Wheat	vacuole	78.12	78.4
EER90302	Sorghum	extracellular	73.96	73.96
GSMUA_Achr10P...	Banana	extracellular	66.32	67.73
GSMUA_Achr6P30850_001	Banana	extracellular	65.28	66.67
GSMUA_Achr10P...	Banana	extracellular	64.24	64.24
KRH19006	Soybean	vacuole	63.89	62.8
KRH02889	Soybean	extracellular	62.5	61.86
Os06t0697000-02	Rice	extracellular	60.76	60.34
Os06t0696400-01	Rice	extracellular	60.42	59.39
Solyc07g006860.2.1	Tomato	extracellular	58.68	59.3
PGSC0003DMT400048241	Potato	extracellular	58.68	59.3
Zm00001d014614_P001	Maize	nucleus, plastid	73.96	56.5
Zm00001d014615_P002	Maize	extracellular	73.96	56.5
AT2G18800.1	Thale cress	extracellular	59.03	55.74
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	44.44	53.56
CDY49308	Canola	extracellular	57.99	53.18
Os04t0604300-01	Rice	extracellular	48.26	49.64
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	56.25	49.54
Os04t0604200-01	Rice	extracellular	47.92	47.1
Os11t0539200-01	Rice	extracellular	47.92	46.78
Os08t0237800-00	Rice	extracellular, vacuole	47.92	45.54
Os04t0604900-01	Rice	extracellular, vacuole	49.65	44.55
Os04t0604800-00	Rice	extracellular	44.44	43.54
Os08t0240500-00	Rice	extracellular	34.03	42.79
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	46.88	42.32
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	11.81	39.08

Protein Annotations

Gene3D:2.60.120.200	EntrezGene:4341942	MapMan:50.2.4	EMBL:AK105934	ProteinID:BAD53913.1	ProteinID:BAD54449.1
ProteinID:BAF20371.1	ProteinID:BAS99292.1	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	ProteinID:EAZ38142.1	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042545	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	GO:GO:0080022	InterPro:IPR000757	EnsemblPlantsGene:Os06g0696600	EnsemblPlants:Os06t0696600-01	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF47	UniProt:Q5Z6H0	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000446ECD
InterPro:XET_C	RefSeq:XP_015641166.1	InterPro:XTH	:	:	:

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 12Similar to Xyloglucan endo-transglycosylase homolog. (Os06t0696600-01)

Coordinates

chr6:+:29144888..29146522

Molecular Weight (calculated)

31901.1 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.461

Length

288 amino acids

Sequence
(BLAST)

001: MVSSSNPGRT PPLVAAIVCS VLLLAGGAAG NFYQDVDITW GDGRGKILGN GQLLTLSLDR SSGSGFQSKN QYLYGRFDMQ IKLVPGNSAG TVATFYLSSQ
101: GSQHDEIDFE FLGNASGEPY TVHTNVYSQG KGGREQQFRM WFDPTKDFHT YSVLWNPSHI LFYVDGTPIR EYRNTEATTG VAFPRAQAMR VYASLWDAEE
201: WATQGGRVRT DWSRAPFTAS YRGLAASGCT SQDATACANP GSPWMYQQQL DSASQDRLRQ VQRDYMIYNY CADTYRFPQG LPPECTAK

Best Arabidopsis Sequence Match ( AT5G57550.1 )
(BLAST)

001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH

Arabidopsis Description

XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.