Factsheet for Bra038819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49308	Canola	extracellular	98.74	75.16
AT2G18800.1	Thale cress	extracellular	87.03	68.2
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	92.05	67.28
KRH19006	Soybean	vacuole	64.44	52.56
KRH02889	Soybean	extracellular	63.6	52.23
Bra024089.1-P	Field mustard	extracellular	60.67	51.97
Bra002719.1-P	Field mustard	extracellular	61.51	51.94
Bra011179.1-P	Field mustard	extracellular	61.09	51.77
Solyc07g006860.2.1	Tomato	extracellular	61.51	51.58
PGSC0003DMT400048241	Potato	extracellular	61.51	51.58
GSMUA_Achr6P30850_001	Banana	extracellular	59.83	50.71
GSMUA_Achr10P...	Banana	extracellular	59.83	50.71
Bra020433.1-P	Field mustard	extracellular	54.81	50.38
Bra013922.1-P	Field mustard	extracellular	59.0	49.13
Bra008806.1-P	Field mustard	extracellular	59.0	49.13
Bra002722.1-P	Field mustard	extracellular	58.16	48.94
Bra020434.1-P	Field mustard	extracellular	57.32	48.07
Bra020432.1-P	Field mustard	extracellular	56.49	47.7
GSMUA_Achr10P...	Banana	extracellular	56.9	47.22
Bra038442.1-P	Field mustard	extracellular	54.39	44.98
Os06t0696600-01	Rice	extracellular	53.56	44.44
TraesCS7A01G427300.1	Wheat	extracellular	52.72	44.21
TraesCS7A01G427100.1	Wheat	extracellular	52.72	44.21
TraesCS7B01G327400.1	Wheat	extracellular	52.72	44.21
Bra020436.1-P	Field mustard	extracellular	52.3	44.17
EER90302	Sorghum	extracellular	53.14	44.1
TraesCS7D01G419400.1	Wheat	vacuole	52.72	43.9
HORVU7Hr1G098370.1	Barley	extracellular	52.3	43.86
Bra002723.1-P	Field mustard	extracellular	51.88	43.36
Bra014975.1-P	Field mustard	extracellular, vacuole	52.3	42.96
Bra013923.1-P	Field mustard	extracellular	50.63	42.61
Bra019141.1-P	Field mustard	extracellular	50.63	42.31
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	48.12	41.22
Bra006220.1-P	Field mustard	vacuole	48.54	39.59
Bra006814.1-P	Field mustard	extracellular	52.3	39.19
Bra024415.1-P	Field mustard	extracellular	46.44	38.95
Bra011066.1-P	Field mustard	extracellular	46.44	38.01
Bra013164.1-P	Field mustard	extracellular	46.03	37.29
Bra040716.1-P	Field mustard	vacuole	44.35	35.69
Bra017855.1-P	Field mustard	extracellular, vacuole	43.51	35.62
Bra000840.1-P	Field mustard	extracellular	43.1	35.52
Bra019846.1-P	Field mustard	extracellular	41.42	33.11
Zm00001d014614_P001	Maize	nucleus, plastid	51.05	32.36
Zm00001d014615_P002	Maize	extracellular	51.05	32.36
Bra034193.1-P	Field mustard	cytosol	43.51	30.23

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra038819	EnsemblPlants:Bra038819.1	EnsemblPlants:Bra038819.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042545	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	GO:GO:0080022	InterPro:IPR000757	UniProt:M4FCK0	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101
SUPFAM:SSF49899	UniParc:UPI00025410F8	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

AT2G18800 (E=2e-113) ATXTH21, XTH21 | XTH21 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21); hydrolase, acting on glycosyl bonds / xyloglucan endotransglucosylase

Coordinates

chrA07:-:1299739..1300773

Molecular Weight (calculated)

27276.0 Da

IEP (calculated)

9.392

GRAVY (calculated)

-0.673

Length

239 amino acids

Sequence
(BLAST)

001: MQIKLVPGNS AGTVTTFYLK SQGLTWDEID FEFLGNVSGD PYILHTNVYT QGKGDREQQF YLWFDPTAEF HNYSILWNPS HIVFYVDGKP IREFKNLDAM
101: GVAYPKSQPM RMYGSLWNAD DWATRGGLVK TNWSEGPFVA SFMNYNSENA CIWSIDNGTT TNTPCSPSGS SSSSSTSTSE WFSQRGMDSS SRKVLKWVQK
201: KFMVYNYCKD KKRFWQGLPV ECGAKKNNKN KNKNKNIKS

Best Arabidopsis Sequence Match ( AT2G18800.1 )
(BLAST)

001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS

Arabidopsis Description

XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.