Factsheet for Bra014975.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61576	Canola	vacuole	95.53	99.29
AT3G23730.1	Thale cress	extracellular, vacuole	94.16	94.16
Bra038442.1-P	Field mustard	extracellular	86.25	86.85
VIT_05s0062g00610.t01	Wine grape	cytosol	70.1	76.98
VIT_05s0062g00480.t01	Wine grape	cytosol	69.42	76.23
KRH31558	Soybean	nucleus	71.48	75.36
KRG97361	Soybean	nucleus	71.82	74.91
KRH42721	Soybean	extracellular, nucleus	72.16	74.2
KRH58823	Soybean	extracellular, nucleus	71.82	73.85
Solyc12g098610.1.1	Tomato	nucleus	65.64	73.18
VIT_05s0062g00240.t01	Wine grape	extracellular	70.45	72.95
PGSC0003DMT400056316	Potato	extracellular	69.07	72.83
Solyc09g092520.2.1	Tomato	nucleus	68.73	72.46
VIT_05s0062g00250.t01	Wine grape	extracellular	68.73	71.68
PGSC0003DMT400011902	Potato	extracellular	65.98	68.82
Bra013922.1-P	Field mustard	extracellular	59.79	60.63
Bra008806.1-P	Field mustard	extracellular	59.79	60.63
Bra020434.1-P	Field mustard	extracellular	58.42	59.65
Bra002719.1-P	Field mustard	extracellular	57.73	59.36
Bra011179.1-P	Field mustard	extracellular	57.39	59.22
Bra024089.1-P	Field mustard	extracellular	56.7	59.14
Bra002722.1-P	Field mustard	extracellular	57.39	58.8
Bra020436.1-P	Field mustard	extracellular	56.36	57.95
Bra013923.1-P	Field mustard	extracellular	56.36	57.75
Bra019141.1-P	Field mustard	extracellular	56.36	57.34
Bra002723.1-P	Field mustard	extracellular	56.01	56.99
Bra020433.1-P	Field mustard	extracellular	49.48	55.38
Bra020432.1-P	Field mustard	extracellular	51.2	52.65
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	42.96	52.3
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	49.48	51.61
Bra006814.1-P	Field mustard	extracellular	56.01	51.1
Bra006220.1-P	Field mustard	vacuole	50.52	50.17
Bra013164.1-P	Field mustard	extracellular	49.14	48.47
Bra000840.1-P	Field mustard	extracellular	46.74	46.9
Bra024415.1-P	Field mustard	extracellular	45.36	46.32
Bra017855.1-P	Field mustard	extracellular, vacuole	44.67	44.52
Bra011066.1-P	Field mustard	extracellular	44.33	44.18
Bra019846.1-P	Field mustard	extracellular	43.3	42.14
Bra040716.1-P	Field mustard	vacuole	42.27	41.41
Bra034193.1-P	Field mustard	cytosol	45.7	38.66

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra014975	EnsemblPlants:Bra014975.1	EnsemblPlants:Bra014975.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4DEQ3	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF62	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002540DF2	InterPro:XET_C	InterPro:XTH	SEG:seg	:	:

Description

AT3G23730 (E=5e-159) | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative

Coordinates

chrA07:-:4654374..4655413

Molecular Weight (calculated)

33202.4 Da

IEP (calculated)

9.347

GRAVY (calculated)

-0.375

Length

291 amino acids

Sequence
(BLAST)

001: MGQFLNLTVL VTVLVLTTVG TAYSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKK QPMRIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFRSTF ADGESQVPNE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRRSR V

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.