Factsheet for Bra034193.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22110	Canola	extracellular	79.65	94.48
Bra000840.1-P	Field mustard	extracellular	78.2	92.76
AT4G03210.1	Thale cress	extracellular	73.84	87.59
KRH22496	Soybean	extracellular	59.88	71.03
KRH26853	Soybean	vacuole	60.17	69.93
VIT_12s0134g00160.t01	Wine grape	extracellular	58.14	67.57
Solyc07g052980.2.1	Tomato	extracellular	57.56	66.89
PGSC0003DMT400067358	Potato	extracellular	56.98	66.22
KRH25426	Soybean	extracellular	57.27	66.11
KRH56088	Soybean	vacuole	56.1	64.98
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	47.67	61.42
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	47.09	60.0
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	40.12	49.46
EER91282	Sorghum	extracellular, vacuole	46.22	49.38
EES11493	Sorghum	extracellular, vacuole	46.22	48.92
Bra024415.1-P	Field mustard	extracellular	39.83	48.07
Zm00001d002193_P003	Maize	extracellular, vacuole	46.51	47.48
Bra011179.1-P	Field mustard	extracellular	38.37	46.81
Bra006220.1-P	Field mustard	vacuole	39.83	46.76
Bra017855.1-P	Field mustard	extracellular, vacuole	39.24	46.23
Bra013164.1-P	Field mustard	extracellular	39.53	46.1
Bra008806.1-P	Field mustard	extracellular	38.37	45.99
Bra013922.1-P	Field mustard	extracellular	38.37	45.99
Bra014975.1-P	Field mustard	extracellular, vacuole	38.66	45.7
Bra020434.1-P	Field mustard	extracellular	37.79	45.61
Bra024089.1-P	Field mustard	extracellular	36.92	45.52
Bra002719.1-P	Field mustard	extracellular	37.21	45.23
Bra038442.1-P	Field mustard	extracellular	37.79	44.98
Bra019846.1-P	Field mustard	extracellular	38.95	44.82
Bra002722.1-P	Field mustard	extracellular	36.92	44.72
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	30.23	43.51
Bra013923.1-P	Field mustard	extracellular	35.76	43.31
Bra020432.1-P	Field mustard	extracellular	35.47	43.11
Bra020433.1-P	Field mustard	extracellular	31.98	42.31
Bra020436.1-P	Field mustard	extracellular	34.59	42.05
Bra040716.1-P	Field mustard	vacuole	36.05	41.75
Bra019141.1-P	Field mustard	extracellular	34.59	41.61
Bra002723.1-P	Field mustard	extracellular	34.59	41.61
Bra011066.1-P	Field mustard	extracellular	34.01	40.07
Bra006814.1-P	Field mustard	extracellular	34.3	36.99

Protein Annotations

Gene3D:2.60.120.200	InterPro:2Fe-2S_ferredoxin-like_sf	Gene3D:3.10.20.30	MapMan:7.11.2.1.5	InterPro:Beta-grasp_dom_sf	InterPro:Beta_glucanase
EnsemblPlantsGene:Bra034193	EnsemblPlants:Bra034193.1	EnsemblPlants:Bra034193.1-P	InterPro:ConA-like_dom_sf	InterPro:GH16	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0022900	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0051536	GO:GO:0071555	InterPro:IPR000757	InterPro:IPR012675	UniProt:M4EZF0	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11
SUPFAM:SSF49899	SUPFAM:SSF54292	UniParc:UPI0002543BE9	InterPro:XET_C	InterPro:XTH	:

Description

AT4G03210 (E=9e-156) XTH9 | XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA01:-:27006027..27007829

Molecular Weight (calculated)

38883.5 Da

IEP (calculated)

4.860

GRAVY (calculated)

-0.384

Length

344 amino acids

Sequence
(BLAST)

001: MVCVVSCGEA APGAKFEELY RSSWAMDHCV NDGEVTKLKL DNSSGAGFES RSKYLFGKVS IQIKLVEGDS AGTVTAFYMS SEGSNHNEFD FDFLGNTTGE
101: PYIVQTNVYV NGVGNREQRL NLWFDPTTEF HTYSILWSKR SVVFIVDETP IRVHKNLEDK GIPFAKDQAM GVYSSIWNAD DWATQGGLVK TDWSHAPFIA
201: SYKDFKIDAC EVPTARDLSK CSGEEQRFWW DEPTVSELSL HQNHQLIWVR ANHMIYDYCF DAARFPVTPL ECQHHRHLIK SNYNKLEEPT DEEENDMLDL
301: AFGLTKAARL GCQVIARPEL DGVRLAIPSA TRNFAVDGFV PEPH

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.