Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67487 | Canola | extracellular | 98.85 | 98.85 |
| Bra002719.1-P | Field mustard | extracellular | 93.85 | 86.22 |
| CDY02741 | Canola | extracellular | 93.46 | 82.65 |
| Bra008806.1-P | Field mustard | extracellular | 83.46 | 75.61 |
| Bra013922.1-P | Field mustard | extracellular | 83.08 | 75.26 |
| Bra024089.1-P | Field mustard | extracellular | 71.15 | 66.31 |
| Bra011179.1-P | Field mustard | extracellular | 70.77 | 65.25 |
| KRH19136 | Soybean | nucleus | 68.46 | 62.9 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 68.08 | 62.11 |
| KRH37378 | Soybean | nucleus | 61.54 | 60.15 |
| PGSC0003DMT400036329 | Potato | extracellular | 64.23 | 59.22 |
| Bra002722.1-P | Field mustard | extracellular | 63.08 | 57.75 |
| Bra020434.1-P | Field mustard | extracellular | 63.08 | 57.54 |
| Solyc05g046290.2.1 | Tomato | extracellular | 63.46 | 57.29 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 62.69 | 56.4 |
| Solyc07g009380.2.1 | Tomato | extracellular, nucleus | 59.62 | 56.36 |
| Bra038819.1-P | Field mustard | cytosol, extracellular, nucleus | 50.38 | 54.81 |
| Bra020436.1-P | Field mustard | extracellular | 58.46 | 53.71 |
| Bra013923.1-P | Field mustard | extracellular | 58.08 | 53.17 |
| Bra002723.1-P | Field mustard | extracellular | 58.08 | 52.8 |
| Bra020432.1-P | Field mustard | extracellular | 56.92 | 52.3 |
| Bra038442.1-P | Field mustard | extracellular | 56.92 | 51.21 |
| Bra019141.1-P | Field mustard | extracellular | 55.77 | 50.7 |
| KRH12375 | Soybean | extracellular | 61.54 | 50.63 |
| Bra014975.1-P | Field mustard | extracellular, vacuole | 55.38 | 49.48 |
| Bra006814.1-P | Field mustard | extracellular | 57.69 | 47.02 |
| Bra008796.1-P | Field mustard | cytosol, extracellular, nucleus | 47.69 | 44.44 |
| Bra006220.1-P | Field mustard | vacuole | 47.31 | 41.98 |
| Bra017855.1-P | Field mustard | extracellular, vacuole | 45.38 | 40.41 |
| Bra011066.1-P | Field mustard | extracellular | 45.38 | 40.41 |
| Bra013164.1-P | Field mustard | extracellular | 45.77 | 40.34 |
| Bra024415.1-P | Field mustard | extracellular | 43.85 | 40.0 |
| Bra000840.1-P | Field mustard | extracellular | 42.31 | 37.93 |
| Bra019846.1-P | Field mustard | extracellular | 41.54 | 36.12 |
| Bra040716.1-P | Field mustard | vacuole | 39.62 | 34.68 |
| Bra034193.1-P | Field mustard | cytosol | 42.31 | 31.98 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | EnsemblPlantsGene:Bra020433 | EnsemblPlants:Bra020433.1 | EnsemblPlants:Bra020433.1-P |
| InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009408 | GO:GO:0009409 | GO:GO:0009605 | GO:GO:0009612 | GO:GO:0009628 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009741 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 |
| GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
| GO:GO:0071555 | InterPro:IPR000757 | UniProt:M4DV89 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF20 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | UniParc:UPI0002545EE8 | InterPro:XET_C | InterPro:XTH | SEG:seg | : |
Description
AT4G30270 (E=2e-108) MERI5B, MERI-5, SEN4 | MERI5B (meristem-5); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase
Coordinates
chrA02:+:6735184..6740887
Molecular Weight (calculated)
29610.9 Da
IEP (calculated)
5.368
GRAVY (calculated)
-0.463
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSYLFPLF LSLIVISSVS ANFQRDVEIT WGDGRGQITN NGELLTLSLD KSSGSGFQSK NEYLFGKIDM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNLSGDP YTLHTNVYTQ GKGDKEQQFK LWFDPTADFH TYTILWNPQR IIFTVDGTPI REFKNMESIG TLFPKNRPMR MYSSLWNADD WATRDIIWSN
201: GKSSCPDVSK QGTTGSWLSQ ELDSTAQERM RWVQRNYMIY NYCTDAKRFP QGLPKECLAA
101: EFLGNLSGDP YTLHTNVYTQ GKGDKEQQFK LWFDPTADFH TYTILWNPQR IIFTVDGTPI REFKNMESIG TLFPKNRPMR MYSSLWNADD WATRDIIWSN
201: GKSSCPDVSK QGTTGSWLSQ ELDSTAQERM RWVQRNYMIY NYCTDAKRFP QGLPKECLAA
001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA
Arabidopsis Description
XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.