Factsheet for Bra017855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72656	Canola	extracellular, vacuole	99.32	99.32
CDY31620	Canola	extracellular, vacuole	99.32	98.98
AT4G37800.1	Thale cress	extracellular, vacuole	94.18	93.86
GSMUA_Achr8P26470_001	Banana	extracellular	75.34	76.92
GSMUA_Achr3P26220_001	Banana	extracellular	73.63	75.17
GSMUA_Achr8P05120_001	Banana	extracellular	73.63	75.17
KRH04364	Soybean	extracellular	72.6	72.6
KRH58172	Soybean	extracellular, vacuole	72.26	72.51
Bra024415.1-P	Field mustard	extracellular	70.55	72.28
PGSC0003DMT400055138	Potato	extracellular	72.26	71.53
KRH77174	Soybean	extracellular	72.26	71.28
Solyc02g091920.2.1	Tomato	nucleus	71.92	71.19
KRH28311	Soybean	extracellular, vacuole	71.58	70.37
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	65.07	64.41
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	47.95	50.18
Bra006220.1-P	Field mustard	vacuole	48.29	48.12
Bra000840.1-P	Field mustard	extracellular	46.92	47.24
Bra008806.1-P	Field mustard	extracellular	46.23	47.04
Bra013922.1-P	Field mustard	extracellular	46.23	47.04
Bra013164.1-P	Field mustard	extracellular	47.26	46.78
Bra020436.1-P	Field mustard	extracellular	44.86	46.29
Bra002719.1-P	Field mustard	extracellular	44.86	46.29
Bra040716.1-P	Field mustard	vacuole	46.92	46.13
Bra020434.1-P	Field mustard	extracellular	44.86	45.96
Bra024089.1-P	Field mustard	extracellular	43.84	45.88
Bra002723.1-P	Field mustard	extracellular	44.86	45.8
Bra002722.1-P	Field mustard	extracellular	44.52	45.77
Bra013923.1-P	Field mustard	extracellular	44.52	45.77
Bra020432.1-P	Field mustard	extracellular	44.18	45.58
Bra020433.1-P	Field mustard	extracellular	40.41	45.38
Bra019141.1-P	Field mustard	extracellular	44.18	45.1
Bra038442.1-P	Field mustard	extracellular	44.52	44.98
Bra014975.1-P	Field mustard	extracellular, vacuole	44.52	44.67
Bra011179.1-P	Field mustard	extracellular	42.81	44.33
Bra019846.1-P	Field mustard	extracellular	45.21	44.15
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	35.62	43.51
Bra011066.1-P	Field mustard	extracellular	42.47	42.47
Bra006814.1-P	Field mustard	extracellular	43.15	39.5
Bra034193.1-P	Field mustard	cytosol	46.23	39.24

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	ProteinID:ACB86852	ProteinID:ACB86852.1	EnsemblPlantsGene:Bra017855	EnsemblPlants:Bra017855.1
EnsemblPlants:Bra017855.1-P	InterPro:ConA-like_dom_sf	EMBL:EU579461	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:M4DMW8	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF48
SUPFAM:SSF49899	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0002540D62	InterPro:XET_C	InterPro:XTH

Description

AT4G37800 (E=3e-169) | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative

Coordinates

chrA03:-:31007723..31009312

Molecular Weight (calculated)

33414.4 Da

IEP (calculated)

7.803

GRAVY (calculated)

-0.374

Length

292 amino acids

Sequence
(BLAST)

001: MVVSLFSARN AFFISLCLFA ALYRPVLSKP AKFADDFRIT WSDTHITQID GGRAIQLKLD PSSGCGFASK KQYLFGRVSM KIKLIPGDSA GTVAAFYMNS
101: DTDSVRDELD FEFLGNRSGQ PYTVQTNVFA HGKGDREQRV NLWFDPSRDF HEYAISWNHL RIVFYVDNVP IRVYKNNEAR KVPYPRFQPM GVYSTLWEAD
201: DWATRGGIEK INWSEAPFYA YYKDFDIEGC SVPGPAGCPA NPKNWWEGSA YHQLTPVEAR SYRWVRVNYM IYDYCTDKSR FPVPPPECSA GI

Best Arabidopsis Sequence Match ( AT4G37800.1 )
(BLAST)

001: MVVSLFSSRN VFYTLSLCLF AALYQPVMSR PAKFEDDFRI AWSDTHITQI DGGRAIQLKL DPSSGCGFAS KKQYLFGRVS MKIKLIPGDS AGTVTAFYMN
101: SDTDSVRDEL DFEFLGNRSG QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA RKVPYPRFQP MGVYSTLWEA
201: DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI

Arabidopsis Description

XTH7Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LER3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.