Factsheet for Bra020434.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G57550.1	Thale cress	extracellular	89.12	89.44
Bra002722.1-P	Field mustard	extracellular	88.42	88.73
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	51.58	76.17
GSMUA_Achr10P...	Banana	cytosol	49.82	71.36
GSMUA_Achr3P05220_001	Banana	cytosol	51.93	71.15
GSMUA_Achr7P16430_001	Banana	cytosol	51.93	69.48
GSMUA_Achr9P13820_001	Banana	cytosol	50.53	68.9
HORVU7Hr1G098320.3	Barley	vacuole	68.42	67.47
GSMUA_Achr5P21880_001	Banana	cytosol	50.18	67.14
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	68.42	66.78
TraesCS7A01G426100.1	Wheat	vacuole	67.37	66.44
TraesCS7D01G419300.1	Wheat	extracellular	67.37	66.21
TraesCS7A01G426900.1	Wheat	extracellular	66.32	66.08
TraesCS7D01G419100.1	Wheat	extracellular	66.67	65.97
TraesCS7A01G427000.1	Wheat	extracellular	65.96	65.73
Bra002719.1-P	Field mustard	extracellular	65.26	65.72
TraesCS7A01G426600.1	Wheat	vacuole	66.67	65.52
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	51.23	65.47
TraesCS7B01G327000.1	Wheat	extracellular	67.02	65.41
TraesCS7B01G326900.1	Wheat	extracellular	66.32	65.4
TraesCS7B01G327200.1	Wheat	extracellular	65.61	65.38
TraesCS7D01G419200.1	Wheat	extracellular	65.61	65.38
Bra013922.1-P	Field mustard	extracellular	65.61	65.16
HORVU7Hr1G098260.1	Barley	vacuole	66.67	65.07
Bra008806.1-P	Field mustard	extracellular	65.26	64.81
TraesCS7A01G426700.1	Wheat	extracellular	65.61	64.71
Os06t0697000-02	Rice	extracellular	65.26	64.14
Bra011179.1-P	Field mustard	extracellular	63.16	63.83
Bra024089.1-P	Field mustard	extracellular	62.46	63.8
Bra020433.1-P	Field mustard	extracellular	57.54	63.08
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.16	62.44
Solyc07g006870.2.1	Tomato	extracellular, vacuole	61.75	62.41
Bra013923.1-P	Field mustard	extracellular	61.75	61.97
EER90303	Sorghum	extracellular, golgi, vacuole	65.26	61.79
Zm00001d014617_P001	Maize	extracellular	64.56	61.74
PGSC0003DMT400048242	Potato	extracellular	60.35	61.65
Bra002723.1-P	Field mustard	extracellular	61.05	60.84
Bra038442.1-P	Field mustard	extracellular	61.4	60.55
Bra020436.1-P	Field mustard	extracellular	60.0	60.42
TraesCS7D01G418600.1	Wheat	vacuole	66.67	59.56
Bra019141.1-P	Field mustard	extracellular	59.65	59.44
HORVU7Hr1G098440.2	Barley	extracellular	59.65	59.44
TraesCS7D01G419900.1	Wheat	extracellular	59.65	59.23
TraesCS7A01G427600.1	Wheat	extracellular	59.65	58.82
Bra014975.1-P	Field mustard	extracellular, vacuole	59.65	58.42
TraesCS7B01G327700.1	Wheat	extracellular	58.95	57.93
EER88885	Sorghum	extracellular	58.95	57.53
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	48.07	57.32
Zm00001d014613_P001	Maize	plasma membrane	58.25	57.24
Bra020432.1-P	Field mustard	extracellular	56.49	56.89
Os06t0696400-01	Rice	extracellular	58.25	56.66
Zm00001d009309_P001	Maize	extracellular, vacuole	54.39	55.96
Bra006814.1-P	Field mustard	extracellular	59.65	53.29
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	47.72	48.75
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	67.37	48.0
Bra006220.1-P	Field mustard	vacuole	48.42	47.1
Bra024415.1-P	Field mustard	extracellular	46.32	46.32
Bra013164.1-P	Field mustard	extracellular	47.37	45.76
Bra011066.1-P	Field mustard	extracellular	46.67	45.55
Bra000840.1-P	Field mustard	extracellular	46.32	45.52
Bra017855.1-P	Field mustard	extracellular, vacuole	45.96	44.86
Bra019846.1-P	Field mustard	extracellular	43.86	41.81
Bra040716.1-P	Field mustard	vacuole	42.81	41.08
Bra034193.1-P	Field mustard	cytosol	45.61	37.79

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra020434	EnsemblPlants:Bra020434.1	EnsemblPlants:Bra020434.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4DV90	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002545EE9	InterPro:XET_C	InterPro:XTH	SEG:seg	:	:

Description

AT5G57550 (E=4e-146) XTR3 | XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA02:+:6741619..6742661

Molecular Weight (calculated)

32489.4 Da

IEP (calculated)

7.964

GRAVY (calculated)

-0.381

Length

285 amino acids

Sequence
(BLAST)

001: MDRSTFILSI LLTLTATTTT FFSPVYAGTF DMEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQSKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYVM HTNVYNQGKG DREQQFNLWF DPTADFHTYS VLWNPHHIVF LVDGIAIRQF KNLEHRGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS NAPFTASYRN FRADACVSFA GKSSCPASSP RWFTQKLDLT AEDKMRVVQS KFMVYNYCTD TKRFPQGVPK ECNIH

Best Arabidopsis Sequence Match ( AT5G57550.1 )
(BLAST)

001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH

Arabidopsis Description

XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.