CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014617_P001	Maize	extracellular	85.71	86.58
Os06t0697000-02	Rice	extracellular	82.39	85.52
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	63.12	85.2
TraesCS7A01G426900.1	Wheat	extracellular	80.07	84.27
TraesCS7A01G427000.1	Wheat	extracellular	80.07	84.27
TraesCS7D01G419300.1	Wheat	extracellular	80.73	83.79
TraesCS7A01G426100.1	Wheat	vacuole	80.07	83.39
TraesCS7D01G419100.1	Wheat	extracellular	79.73	83.33
HORVU7Hr1G098320.3	Barley	vacuole	79.73	83.05
TraesCS7B01G327200.1	Wheat	extracellular	78.74	82.87
TraesCS7D01G419200.1	Wheat	extracellular	78.74	82.87
TraesCS7A01G426600.1	Wheat	vacuole	79.73	82.76
TraesCS7A01G426700.1	Wheat	extracellular	79.4	82.7
TraesCS7B01G326900.1	Wheat	extracellular	79.07	82.35
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	79.73	82.19
TraesCS7B01G327000.1	Wheat	extracellular	78.74	81.16
HORVU7Hr1G098260.1	Barley	vacuole	78.07	80.48
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	51.16	79.79
GSMUA_Achr3P05220_001	Banana	cytosol	54.15	78.37
GSMUA_Achr10P...	Banana	cytosol	51.49	77.89
GSMUA_Achr7P16430_001	Banana	cytosol	54.82	77.46
GSMUA_Achr9P13820_001	Banana	cytosol	52.82	76.08
TraesCS7D01G418600.1	Wheat	vacuole	79.4	74.92
GSMUA_Achr5P21880_001	Banana	cytosol	52.49	74.18
EER88885	Sorghum	extracellular	67.11	69.18
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.85	67.01
AT5G57550.1	Thale cress	extracellular	63.12	66.9
Bra020434.1-P	Field mustard	extracellular	61.79	65.26
PGSC0003DMT400048242	Potato	extracellular	59.47	64.16
Bra002722.1-P	Field mustard	extracellular	60.47	64.08
CDY67778	Canola	extracellular	60.47	64.08
VIT_11s0052g01230.t01	Wine grape	cytosol	59.14	64.03
Solyc07g006870.2.1	Tomato	extracellular, vacuole	59.8	63.83
CDY25904	Canola	extracellular	60.13	63.73
AT4G25820.1	Thale cress	extracellular	58.8	61.67
CDY67779	Canola	extracellular	58.47	61.54
Bra002723.1-P	Field mustard	extracellular	58.47	61.54
Bra013923.1-P	Field mustard	extracellular	57.81	61.27
CDY69806	Canola	extracellular	57.81	61.27
EER90302	Sorghum	extracellular	58.47	61.11
AT5G57540.1	Thale cress	extracellular	57.48	60.92
CDY11863	Canola	extracellular	57.81	60.84
CDY67488	Canola	extracellular	57.14	60.78
AT5G57530.1	Thale cress	extracellular	57.48	60.7
Bra020436.1-P	Field mustard	extracellular	56.81	60.42
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	80.07	60.25
CDX88627	Canola	extracellular	57.14	60.14
CDY02738	Canola	extracellular, nucleus, vacuole	42.86	60.0
CDY50186	Canola	extracellular	56.48	59.44
Bra019141.1-P	Field mustard	extracellular	56.48	59.44
CDX92733	Canola	extracellular	56.15	59.09
EES12802	Sorghum	endoplasmic reticulum, extracellular	50.83	53.87
Bra006814.1-P	Field mustard	extracellular	56.48	53.29
EES12801	Sorghum	extracellular	50.5	50.16
PGSC0003DMT400048240	Potato	golgi	56.48	49.71
Solyc07g006850.1.1	Tomato	golgi	56.48	49.71
OQU83588	Sorghum	extracellular	48.17	47.85
EES13579	Sorghum	vacuole	46.18	47.77
KXG24787	Sorghum	vacuole	45.85	47.1
EER89799	Sorghum	vacuole	45.85	46.94
EES04929	Sorghum	extracellular, vacuole	45.18	46.9
EER88886	Sorghum	golgi	48.17	46.03
EES04926	Sorghum	extracellular, vacuole	44.85	45.76
OQU75596	Sorghum	cytosol, extracellular, plastid	24.58	45.68
EES13577	Sorghum	extracellular	42.86	45.1
EES11382	Sorghum	extracellular, vacuole	42.52	42.95
KXG36371	Sorghum	extracellular	45.51	42.95
EES13578	Sorghum	extracellular	40.86	42.86
EER91282	Sorghum	extracellular, vacuole	45.18	42.24
EES11493	Sorghum	extracellular, vacuole	45.18	41.85

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8065133	UniProt:C5Z8T5	InterPro:ConA-like_dom_sf	EnsemblPlants:EER90303
ProteinID:EER90303	ProteinID:EER90303.1	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101	EnsemblPlantsGene:SORBI_3010G246700	SUPFAM:SSF49899
unigene:Sbi.3360	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A89765	InterPro:XET_C	RefSeq:XP_002438936.1
InterPro:XTH	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:58679152..58680848

Molecular Weight (calculated)

33417.3 Da

IEP (calculated)

7.536

GRAVY (calculated)

-0.434

Length

301 amino acids

Sequence
(BLAST)

001: MASRRVSLLL GVLLSYSAAV AVAVAAANFN QEFDITWGDG RGKIQDNGQL LTLTLDRTSG SGFQSRHEYL FGKIDMQLKL VPGNSAGTVT AYYLSSQGNT
101: HDEIDFEFLG NVSGEPYTLH TNVFTQGQGQ REQQFRLWFD PTKDFHTYSI LWNPKHVIFM VDEMPIRDFR NLESKGVAFP KNQPMRLYSS LWNADDWATQ
201: GGRVKTDWSH APFSASYRGF RADACVAVAG GKTRCGGGGG GGAVGTEGAG AGAPAGDWYN QELDLTLQQR MRWVQRKYMI YNYCTDPKRY PQGLPAECSM
301: Q

Best Arabidopsis Sequence Match ( AT5G57550.1 )
(BLAST)

001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH

Arabidopsis Description

XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.