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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:cytosol, extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013923.1-P Field mustard extracellular 100.0 100.0
CDY50186 Canola extracellular 88.03 87.41
CDX92733 Canola extracellular 87.68 87.06
AT4G25820.1 Thale cress extracellular 84.51 83.62
CDY67488 Canola extracellular 79.23 79.51
CDY67779 Canola extracellular 79.93 79.37
CDX88627 Canola extracellular 79.93 79.37
CDY11863 Canola extracellular 79.93 79.37
CDY02738 Canola extracellular, nucleus, vacuole 57.04 75.35
GSMUA_Achr4P02240_001 Banana cytosol, mitochondrion, nucleus 46.13 67.88
GSMUA_Achr10P... Banana cytosol 46.83 66.83
GSMUA_Achr3P05220_001 Banana cytosol 47.54 64.9
GSMUA_Achr5P21880_001 Banana cytosol 47.18 62.91
GSMUA_Achr9P13820_001 Banana cytosol 46.13 62.68
GSMUA_Achr7P16430_001 Banana cytosol 46.48 61.97
CDY59999 Canola extracellular 52.82 60.73
Os06t0697000-02 Rice extracellular 61.97 60.69
HORVU7Hr1G098320.3 Barley vacuole 60.92 59.86
CDY67778 Canola extracellular 59.86 59.86
CDY25904 Canola extracellular 59.86 59.86
TraesCS7A01G426900.1 Wheat extracellular 60.21 59.79
TraesCS7B01G327000.1 Wheat extracellular 61.27 59.59
CDX89393 Canola extracellular 60.21 59.58
TraesCS7B01G327200.1 Wheat extracellular 59.86 59.44
TraesCS7A01G427000.1 Wheat extracellular 59.86 59.44
TraesCS7D01G419300.1 Wheat extracellular 60.56 59.31
HORVU0Hr1G022110.1 Barley extracellular, vacuole 60.92 59.25
CDY25903 Canola extracellular 54.23 59.23
TraesCS7D01G418700.1 Wheat cytosol, mitochondrion, nucleus 46.48 59.19
TraesCS7B01G326900.1 Wheat extracellular 60.21 59.17
TraesCS7D01G419100.1 Wheat extracellular 59.86 59.03
CDX94413 Canola extracellular 59.51 58.88
CDY67487 Canola extracellular 53.87 58.85
TraesCS7A01G426100.1 Wheat vacuole 59.86 58.82
TraesCS7A01G426700.1 Wheat extracellular 59.51 58.48
TraesCS7D01G419200.1 Wheat extracellular 58.8 58.39
CDY14905 Canola extracellular 55.63 58.3
TraesCS7A01G426600.1 Wheat vacuole 59.51 58.28
HORVU7Hr1G098260.1 Barley vacuole 59.86 58.22
CDY66832 Canola extracellular 55.28 57.93
CDY61576 Canola vacuole 57.04 57.86
EER90303 Sorghum extracellular, golgi, vacuole 61.27 57.81
CDY39193 Canola extracellular 55.28 57.72
Solyc07g006870.2.1 Tomato extracellular, vacuole 57.04 57.45
CDY28174 Canola extracellular 57.04 57.45
GSMUA_Achr3P05200_001 Banana cytosol, plastid, vacuole 39.79 57.36
CDY27126 Canola extracellular 58.1 57.09
CDX68640 Canola extracellular 56.69 57.09
Zm00001d014617_P001 Maize extracellular 59.86 57.05
PGSC0003DMT400048242 Potato extracellular 55.99 56.99
EER88885 Sorghum extracellular 57.75 56.16
TraesCS7D01G419900.1 Wheat extracellular 56.69 56.1
HORVU7Hr1G098440.2 Barley extracellular 56.34 55.94
TraesCS7B01G327700.1 Wheat extracellular 57.04 55.86
Os06t0696400-01 Rice extracellular 57.39 55.63
CDX72228 Canola extracellular 54.58 55.56
TraesCS7A01G427600.1 Wheat extracellular 56.34 55.36
CDX72227 Canola extracellular 52.46 54.98
CDY59998 Canola extracellular 54.23 54.42
Zm00001d014613_P001 Maize plasma membrane 55.28 54.14
TraesCS7D01G418600.1 Wheat vacuole 59.86 53.29
Zm00001d009309_P001 Maize extracellular, vacuole 51.41 52.71
CDY49308 Canola extracellular 56.34 50.96
CDY02741 Canola extracellular 52.11 50.34
CDY03539 Canola endoplasmic reticulum, extracellular 55.28 50.32
CDY12366 Canola extracellular 49.65 49.65
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 54.58 47.4
CDY06861 Canola extracellular 47.89 46.58
CDY35228 Canola extracellular 47.89 46.58
CDX69621 Canola vacuole 47.18 45.73
CDY09832 Canola vacuole 47.18 45.73
CDY69237 Canola extracellular 47.18 45.42
CDX93096 Canola extracellular 46.83 45.08
CDX78542 Canola vacuole 46.48 44.3
CDY08756 Canola extracellular 44.37 44.21
CDY45623 Canola extracellular 44.37 44.21
CDX72656 Canola extracellular, vacuole 45.42 44.18
CDY31620 Canola extracellular, vacuole 45.42 44.03
CDX70524 Canola vacuole 46.13 43.96
CDY22110 Canola extracellular 44.01 43.1
CDY21985 Canola extracellular 44.01 43.1
CDY53771 Canola extracellular 43.66 42.76
HORVU7Hr1G098280.1 Barley extracellular, mitochondrion, vacuole 60.21 42.75
CDX71167 Canola vacuole 44.37 42.42
CDX90896 Canola extracellular 43.31 42.41
CDY49788 Canola extracellular 43.31 41.14
CDX97967 Canola extracellular 43.31 41.14
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078JWE1UniProt:A0A078JWE1InterPro:Beta_glucanase
EnsemblPlants:CDY69806ProteinID:CDY69806ProteinID:CDY69806.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_AS
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618
GO:GO:0005623GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0010411GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798
GO:GO:0030312GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00092764001InterPro:IPR000757
PFAM:PF00722PFAM:PF06955PIRSF:PIRSF005604PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762
PANTHER:PTHR31062PANTHER:PTHR31062:SF20SUPFAM:SSF49899SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002546A1A
InterPro:XET_CInterPro:XTHSEG:seg:::
Description
BnaAnng31590DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078JWE1]
Coordinates
chrLK040398:+:1675..3192
Molecular Weight (calculated)
32200.8 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.333
Length
284 amino acids
Sequence
(BLAST)
001: MAVSATKKPL LLLSLFFFVV AASAGNFYES FDITWGDGRA KILEDGQLLT CTLDKISGSG FQSKKEYLYG KIDMKLKLVA GNSAGTVTAY YLSSKGATWD
101: EIDFEFLGNL TGQPYTIHTN VFTGGKGDRE MQFHLWFDPT ADFHTYTVHW NPVNIIFLVD GIPIRVFKNN EKNGVGYPTS QPMKIYSSLW EADDWATQGG
201: RVKIDWSNAP FSASYRSFND QSACSRTSNA TWVACDANKD SWMWTSLNNH QYGQMKWVQD EFMIYNYCTD YKRFPQGLAK ECNL
Best Arabidopsis Sequence Match ( AT4G25820.1 )
(BLAST)
001: MACFATKQPL LLSLLLAIGF FVVAASAGNF YESFDITWGN GRANIFENGQ LLTCTLDKVS GSGFQSKKEY LFGKIDMKLK LVAGNSAGTV TAYYLSSKGT
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL
Arabidopsis Description
XTH14Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UTG4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.