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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014975.1-P Field mustard extracellular, vacuole 99.29 95.53
AT3G23730.1 Thale cress extracellular, vacuole 93.21 89.69
CDY27126 Canola extracellular 85.71 83.05
VIT_05s0062g00610.t01 Wine grape cytosol 72.5 76.6
VIT_05s0062g00480.t01 Wine grape cytosol 71.79 75.85
KRH31558 Soybean nucleus 73.21 74.28
KRG97361 Soybean nucleus 73.57 73.84
CDY12366 Canola extracellular 74.29 73.24
KRH42721 Soybean extracellular, nucleus 73.93 73.14
Solyc12g098610.1.1 Tomato nucleus 67.86 72.8
KRH58823 Soybean extracellular, nucleus 73.57 72.79
PGSC0003DMT400056316 Potato extracellular 71.07 72.1
VIT_05s0062g00240.t01 Wine grape extracellular 72.14 71.89
Solyc09g092520.2.1 Tomato nucleus 70.71 71.74
VIT_05s0062g00250.t01 Wine grape extracellular 71.07 71.33
PGSC0003DMT400011902 Potato extracellular 68.21 68.46
CDY39193 Canola extracellular 57.86 59.56
CDY14905 Canola extracellular 57.5 59.41
CDY02738 Canola extracellular, nucleus, vacuole 45.36 59.07
CDY66832 Canola extracellular 57.14 59.04
CDX89393 Canola extracellular 60.36 58.88
CDX72228 Canola extracellular 58.21 58.42
CDX94413 Canola extracellular 59.64 58.19
CDX68640 Canola extracellular 58.21 57.8
CDY28174 Canola extracellular 58.21 57.8
CDY67778 Canola extracellular 58.57 57.75
CDY25904 Canola extracellular 58.21 57.39
CDY67488 Canola extracellular 57.86 57.24
CDY59999 Canola extracellular 50.36 57.09
CDY69806 Canola extracellular 57.86 57.04
CDY11863 Canola extracellular 57.86 56.64
CDY50186 Canola extracellular 57.86 56.64
CDX88627 Canola extracellular 57.86 56.64
CDY67779 Canola extracellular 57.86 56.64
CDX72227 Canola extracellular 54.64 56.46
CDX92733 Canola extracellular 57.14 55.94
CDY25903 Canola extracellular 51.43 55.38
CDY67487 Canola extracellular 51.07 55.0
CDY03539 Canola endoplasmic reticulum, extracellular 57.14 51.28
CDY59998 Canola extracellular 51.79 51.24
CDX69621 Canola vacuole 51.43 49.15
CDY09832 Canola vacuole 51.43 49.15
CDX70524 Canola vacuole 51.79 48.66
CDX78542 Canola vacuole 51.79 48.66
CDY69237 Canola extracellular 51.07 48.47
CDX93096 Canola extracellular 51.07 48.47
CDY49308 Canola extracellular 53.57 47.77
CDY02741 Canola extracellular 50.0 47.62
CDY53771 Canola extracellular 48.21 46.55
CDY21985 Canola extracellular 48.21 46.55
CDX90896 Canola extracellular 48.21 46.55
CDY22110 Canola extracellular 47.86 46.21
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 53.57 45.87
CDY08756 Canola extracellular 46.07 45.26
CDY45623 Canola extracellular 45.71 44.91
CDY35228 Canola extracellular 45.36 43.49
CDX72656 Canola extracellular, vacuole 45.36 43.49
CDY06861 Canola extracellular 45.36 43.49
CDY31620 Canola extracellular, vacuole 45.0 43.0
CDX97967 Canola extracellular 44.64 41.81
CDY49788 Canola extracellular 44.64 41.81
CDX71167 Canola vacuole 43.21 40.74
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078J895UniProt:A0A078J895EnsemblPlants:CDY61576
ProteinID:CDY61576ProteinID:CDY61576.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0005975GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411
GO:GO:0016043GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0016798GO:GO:0030312
GO:GO:0042546GO:GO:0048046GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00034024001InterPro:IPR000757PFAM:PF00722
PFAM:PF06955PIRSF:PIRSF005604ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF62
SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0004EE681DInterPro:XET_CInterPro:XTHSEG:seg
Description
BnaCnng38050DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078J895]
Coordinates
chrLK034012:-:16710..18031
Molecular Weight (calculated)
32133.3 Da
IEP (calculated)
9.598
GRAVY (calculated)
-0.361
Length
280 amino acids
Sequence
(BLAST)
001: MGQFLKLTVL VTVLVLTTVG TAYSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKK QPMRIYSSLW NADDWATRGG
201: LVKTDWSKAP FIAYYRGFNA AACTFRSTFA DGESQVPNEL NAYGRRRLRW VQKYFMIYDY CSDLKRFPQG FPPECRRSRV
Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.