Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g098610.1.1 | Tomato | nucleus | 91.4 | 97.7 |
| PGSC0003DMT400056316 | Potato | extracellular | 81.0 | 81.88 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 71.33 | 75.09 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 70.97 | 74.72 |
| KRH31558 | Soybean | nucleus | 73.84 | 74.64 |
| KRG97361 | Soybean | nucleus | 74.19 | 74.19 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 72.04 | 72.04 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 72.04 | 71.53 |
| KRH58823 | Soybean | extracellular, nucleus | 71.68 | 70.67 |
| KRH42721 | Soybean | extracellular, nucleus | 71.33 | 70.32 |
| AT4G14130.1 | Thale cress | extracellular | 71.33 | 68.86 |
| CDY61576 | Canola | vacuole | 68.46 | 68.21 |
| Bra038442.1-P | Field mustard | extracellular | 70.25 | 67.82 |
| CDY27126 | Canola | extracellular | 70.25 | 67.82 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 68.82 | 65.98 |
| Bra014975.1-P | Field mustard | extracellular, vacuole | 68.82 | 65.98 |
| PGSC0003DMT400038413 | Potato | extracellular | 63.44 | 61.89 |
| PGSC0003DMT400036329 | Potato | extracellular | 62.37 | 61.7 |
| PGSC0003DMT400048241 | Potato | extracellular | 62.01 | 60.7 |
| PGSC0003DMT400005949 | Potato | cytosol | 41.94 | 60.31 |
| PGSC0003DMT400048242 | Potato | extracellular | 59.86 | 59.86 |
| PGSC0003DMT400079856 | Potato | extracellular | 61.29 | 59.58 |
| PGSC0003DMT400020314 | Potato | cytosol, nucleus, peroxisome | 58.42 | 59.49 |
| PGSC0003DMT400044562 | Potato | extracellular | 60.22 | 58.54 |
| CDY12366 | Canola | extracellular | 59.14 | 58.1 |
| PGSC0003DMT400020122 | Potato | extracellular | 58.42 | 56.21 |
| PGSC0003DMT400044559 | Potato | extracellular | 56.27 | 54.14 |
| PGSC0003DMT400028324 | Potato | vacuole | 51.97 | 49.15 |
| PGSC0003DMT400005591 | Potato | extracellular | 51.97 | 48.99 |
| PGSC0003DMT400063689 | Potato | vacuole | 50.9 | 47.97 |
| PGSC0003DMT400026398 | Potato | extracellular | 46.24 | 45.58 |
| PGSC0003DMT400055138 | Potato | extracellular | 46.59 | 44.07 |
| PGSC0003DMT400067358 | Potato | extracellular | 46.59 | 43.92 |
| PGSC0003DMT400048240 | Potato | golgi | 53.05 | 43.27 |
| PGSC0003DMT400061841 | Potato | extracellular | 42.29 | 40.0 |
| PGSC0003DMT400013128 | Potato | extracellular | 22.58 | 39.38 |
| PGSC0003DMT400005342 | Potato | extracellular | 41.58 | 38.93 |
Protein Annotations
| EntrezGene:102605759 | Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | UniProt:M1A0D0 | PFAM:PF00722 | PFAM:PF06955 | EnsemblPlantsGene:PGSC0003DMG400004670 | PGSC:PGSC0003DMG400004670 |
| EnsemblPlants:PGSC0003DMT400011902 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF62 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002949F5D | InterPro:XET_C | RefSeq:XP_006349901.1 |
| InterPro:XTH | : | : | : | : | : |
Description
Xyloglucan endo-transglycosylase [Source:PGSC_GENE;Acc:PGSC0003DMG400004670]
Coordinates
chr12:-:59393396..59395557
Molecular Weight (calculated)
32668.9 Da
IEP (calculated)
9.665
GRAVY (calculated)
-0.459
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSHYELPK MLFIFLVFMN SCMFSYGGNF IQEFDFNWGG NKVKIFNGGQ ILSLSMDKLS GSGFQSKKDY LFGRIDMQLK LVTGNSAGTV TSYYLSSKGS
101: THDEIDFEFL GNVSGEPFIL HTNVFSQGKG DKEQQFYLWF DPTKNFHTYS IIWKPQHIIF LVDNTPIRVF KNAESLGVPF PKNQPMKIYS SLWNADDWAT
201: RGGLVKTDWS KAPFTAYYRN FHAQKFNKSQ FLDAKWQNQE LDANGRRRLR WVQRNYMIYN YCTDYKRFPQ GFPLECRKF
101: THDEIDFEFL GNVSGEPFIL HTNVFSQGKG DKEQQFYLWF DPTKNFHTYS IIWKPQHIIF LVDNTPIRVF KNAESLGVPF PKNQPMKIYS SLWNADDWAT
201: RGGLVKTDWS KAPFTAYYRN FHAQKFNKSQ FLDAKWQNQE LDANGRRRLR WVQRNYMIYN YCTDYKRFPQ GFPLECRKF
001: MGPSSSLTTI VATVLLVTLF GSAYASNFFD EFDLTWGDHR GKIFNGGNML SLSLDQVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTA YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV
Arabidopsis Description
XTH15Xyloglucan endotransglucosylase/hydrolase protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q38911]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.