Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g055990.2.1 | Tomato | nucleus | 94.14 | 94.14 |
| PGSC0003DMT400020314 | Potato | cytosol, nucleus, peroxisome | 76.9 | 81.39 |
| PGSC0003DMT400020122 | Potato | extracellular | 79.31 | 79.31 |
| PGSC0003DMT400005949 | Potato | cytosol | 46.9 | 70.1 |
| PGSC0003DMT400079856 | Potato | extracellular | 67.59 | 68.29 |
| PGSC0003DMT400044562 | Potato | extracellular | 66.9 | 67.6 |
| PGSC0003DMT400056316 | Potato | extracellular | 57.59 | 60.51 |
| PGSC0003DMT400038413 | Potato | extracellular | 56.55 | 57.34 |
| PGSC0003DMT400036329 | Potato | extracellular | 55.52 | 57.09 |
| PGSC0003DMT400048242 | Potato | extracellular | 54.48 | 56.63 |
| PGSC0003DMT400011902 | Potato | extracellular | 54.14 | 56.27 |
| PGSC0003DMT400048241 | Potato | extracellular | 55.17 | 56.14 |
| KRH73676 | Soybean | extracellular | 48.62 | 49.82 |
| KRH14468 | Soybean | extracellular | 49.31 | 49.65 |
| PGSC0003DMT400048240 | Potato | golgi | 56.9 | 48.25 |
| PGSC0003DMT400005591 | Potato | extracellular | 48.62 | 47.64 |
| KRG98913 | Soybean | vacuole | 46.9 | 47.22 |
| PGSC0003DMT400067358 | Potato | extracellular | 47.59 | 46.62 |
| PGSC0003DMT400028324 | Potato | vacuole | 46.21 | 45.42 |
| PGSC0003DMT400055138 | Potato | extracellular | 46.21 | 45.42 |
| PGSC0003DMT400026398 | Potato | extracellular | 42.76 | 43.82 |
| PGSC0003DMT400063689 | Potato | vacuole | 44.48 | 43.58 |
| PGSC0003DMT400013128 | Potato | extracellular | 22.07 | 40.0 |
| PGSC0003DMT400061841 | Potato | extracellular | 40.69 | 40.0 |
| PGSC0003DMT400005342 | Potato | extracellular | 40.34 | 39.26 |
Protein Annotations
| EntrezGene:102598622 | Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 |
| UniProt:M1BGD4 | PFAM:PF00722 | PFAM:PF06955 | EnsemblPlantsGene:PGSC0003DMG400017298 | PGSC:PGSC0003DMG400017298 | EnsemblPlants:PGSC0003DMT400044559 |
| PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF62 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000294AFD9 | InterPro:XET_C | RefSeq:XP_006348946.1 |
| InterPro:XTH | SEG:seg | : | : | : | : |
Description
Xyloglucan endotransglucosylase-hydrolase XTH9 [Source:PGSC_GENE;Acc:PGSC0003DMG400017298]
Coordinates
chr7:+:51079173..51081145
Molecular Weight (calculated)
32586.3 Da
IEP (calculated)
8.203
GRAVY (calculated)
-0.446
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSHLLLIS IVLMGSLVAV LAAGNFNDLT EITWGDGRGK ILDGGKGLSL SLDKLSGSGF QSKNEYLYGR FDMQIKFVPR NSAGTVTTFF LSSQGEGHDE
101: IDFEFLGNVT GEPYTVHTNV YSQGKGNKEQ QFHLWFDPTT AFHTYTIVWN ANRIVFLVDE IPIRVYNNHE SIGIAYPKSQ PMKVYCSLWN ADEWATQGGR
201: VKTDWTQAPF TASYKNINID GCVVKSGASS CASRSTDSAN NAKPWETHEL DAKGRNRLRW VQNKHMVYNY CADSKRFPQG YSQECKRSRF
101: IDFEFLGNVT GEPYTVHTNV YSQGKGNKEQ QFHLWFDPTT AFHTYTIVWN ANRIVFLVDE IPIRVYNNHE SIGIAYPKSQ PMKVYCSLWN ADEWATQGGR
201: VKTDWTQAPF TASYKNINID GCVVKSGASS CASRSTDSAN NAKPWETHEL DAKGRNRLRW VQNKHMVYNY CADSKRFPQG YSQECKRSRF
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.