Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
- plastid 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400044562 | Potato | extracellular | 98.26 | 98.26 |
Solyc07g056000.2.1 | Tomato | extracellular, nucleus | 96.86 | 96.86 |
PGSC0003DMT400005949 | Potato | cytosol | 63.41 | 93.81 |
PGSC0003DMT400020314 | Potato | cytosol, nucleus, peroxisome | 69.34 | 72.63 |
PGSC0003DMT400020122 | Potato | extracellular | 70.38 | 69.66 |
PGSC0003DMT400044559 | Potato | extracellular | 68.29 | 67.59 |
PGSC0003DMT400056316 | Potato | extracellular | 61.67 | 64.13 |
PGSC0003DMT400011902 | Potato | extracellular | 59.58 | 61.29 |
PGSC0003DMT400048241 | Potato | extracellular | 60.63 | 61.05 |
PGSC0003DMT400038413 | Potato | extracellular | 59.58 | 59.79 |
PGSC0003DMT400036329 | Potato | extracellular | 57.14 | 58.16 |
PGSC0003DMT400048242 | Potato | extracellular | 56.45 | 58.06 |
KRH73676 | Soybean | extracellular | 53.66 | 54.42 |
KRH14468 | Soybean | extracellular | 52.61 | 52.43 |
KRG98913 | Soybean | vacuole | 49.13 | 48.96 |
PGSC0003DMT400048240 | Potato | golgi | 58.19 | 48.83 |
PGSC0003DMT400026398 | Potato | extracellular | 45.99 | 46.64 |
PGSC0003DMT400005591 | Potato | extracellular | 48.08 | 46.62 |
PGSC0003DMT400063689 | Potato | vacuole | 47.04 | 45.61 |
PGSC0003DMT400028324 | Potato | vacuole | 46.69 | 45.42 |
PGSC0003DMT400055138 | Potato | extracellular | 45.99 | 44.75 |
PGSC0003DMT400067358 | Potato | extracellular | 45.99 | 44.59 |
PGSC0003DMT400013128 | Potato | extracellular | 24.04 | 43.12 |
PGSC0003DMT400061841 | Potato | extracellular | 40.42 | 39.32 |
PGSC0003DMT400005342 | Potato | extracellular | 40.42 | 38.93 |
Protein Annotations
EntrezGene:102605859 | EntrezGene:102606196 | Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf |
InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 |
GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
InterPro:IPR000757 | UniProt:M1D2K9 | PFAM:PF00722 | PFAM:PF06955 | EnsemblPlantsGene:PGSC0003DMG400031101 | PGSC:PGSC0003DMG400031101 |
EnsemblPlants:PGSC0003DMT400079856 | PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 |
PANTHER:PTHR31062:SF62 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI0002966587 | InterPro:XET_C | RefSeq:XP_006366771.1 |
RefSeq:XP_006366772.1 | InterPro:XTH | SEG:seg | : | : | : |
Description
Xyloglucan endotransglycosylase [Source:PGSC_GENE;Acc:PGSC0003DMG400031101]
Coordinates
chr7:-:51575904..51581559
Molecular Weight (calculated)
32406.8 Da
IEP (calculated)
8.574
GRAVY (calculated)
-0.428
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLQLSVLAL VLLSPVWADN FYQDATVTFG DQRAQIQDGG RLLALSLDKI SGSGFQSKNE YLFGRFDMQL KLVPGNSAGT VTTFYLSSQG AGHDEIDFEF
101: LGNSSGQPYT VHTNVYSQGK GNKEQQFRLW FDPTSSFHTY SIVWNSQRII FLVDNIPIRV FNNHEALGVA FPKNQAMRVY ASLWNADDWA TQGGRVKTDW
201: SMAPFTASYR NFNTNACVWS AATSTSSCGG SKTESVNNDQ TWQTQQLNAN GRNRLRWVQQ KYMIYNYCAD ANRFSQGFSP ECKRSRF
101: LGNSSGQPYT VHTNVYSQGK GNKEQQFRLW FDPTSSFHTY SIVWNSQRII FLVDNIPIRV FNNHEALGVA FPKNQAMRVY ASLWNADDWA TQGGRVKTDW
201: SMAPFTASYR NFNTNACVWS AATSTSSCGG SKTESVNNDQ TWQTQQLNAN GRNRLRWVQQ KYMIYNYCAD ANRFSQGFSP ECKRSRF
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.