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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • nucleus 1
  • plastid 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400044562 Potato extracellular 98.26 98.26
Solyc07g056000.2.1 Tomato extracellular, nucleus 96.86 96.86
PGSC0003DMT400005949 Potato cytosol 63.41 93.81
PGSC0003DMT400020314 Potato cytosol, nucleus, peroxisome 69.34 72.63
PGSC0003DMT400020122 Potato extracellular 70.38 69.66
PGSC0003DMT400044559 Potato extracellular 68.29 67.59
PGSC0003DMT400056316 Potato extracellular 61.67 64.13
PGSC0003DMT400011902 Potato extracellular 59.58 61.29
PGSC0003DMT400048241 Potato extracellular 60.63 61.05
PGSC0003DMT400038413 Potato extracellular 59.58 59.79
PGSC0003DMT400036329 Potato extracellular 57.14 58.16
PGSC0003DMT400048242 Potato extracellular 56.45 58.06
KRH73676 Soybean extracellular 53.66 54.42
KRH14468 Soybean extracellular 52.61 52.43
KRG98913 Soybean vacuole 49.13 48.96
PGSC0003DMT400048240 Potato golgi 58.19 48.83
PGSC0003DMT400026398 Potato extracellular 45.99 46.64
PGSC0003DMT400005591 Potato extracellular 48.08 46.62
PGSC0003DMT400063689 Potato vacuole 47.04 45.61
PGSC0003DMT400028324 Potato vacuole 46.69 45.42
PGSC0003DMT400055138 Potato extracellular 45.99 44.75
PGSC0003DMT400067358 Potato extracellular 45.99 44.59
PGSC0003DMT400013128 Potato extracellular 24.04 43.12
PGSC0003DMT400061841 Potato extracellular 40.42 39.32
PGSC0003DMT400005342 Potato extracellular 40.42 38.93
Protein Annotations
EntrezGene:102605859EntrezGene:102606196Gene3D:2.60.120.200MapMan:50.2.4InterPro:Beta_glucanaseInterPro:ConA-like_dom_sf
InterPro:GH16InterPro:GH16_ASGO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575
GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0005975GO:GO:0006073GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0010411GO:GO:0016043GO:GO:0016740GO:GO:0016762
GO:GO:0016787GO:GO:0016798GO:GO:0030312GO:GO:0042546GO:GO:0048046GO:GO:0071555
InterPro:IPR000757UniProt:M1D2K9PFAM:PF00722PFAM:PF06955EnsemblPlantsGene:PGSC0003DMG400031101PGSC:PGSC0003DMG400031101
EnsemblPlants:PGSC0003DMT400079856PIRSF:PIRSF005604PRINTS:PR00737ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062
PANTHER:PTHR31062:SF62SUPFAM:SSF49899SignalP:SignalP-noTMUniParc:UPI0002966587InterPro:XET_CRefSeq:XP_006366771.1
RefSeq:XP_006366772.1InterPro:XTHSEG:seg:::
Description
Xyloglucan endotransglycosylase [Source:PGSC_GENE;Acc:PGSC0003DMG400031101]
Coordinates
chr7:-:51575904..51581559
Molecular Weight (calculated)
32406.8 Da
IEP (calculated)
8.574
GRAVY (calculated)
-0.428
Length
287 amino acids
Sequence
(BLAST)
001: MLLQLSVLAL VLLSPVWADN FYQDATVTFG DQRAQIQDGG RLLALSLDKI SGSGFQSKNE YLFGRFDMQL KLVPGNSAGT VTTFYLSSQG AGHDEIDFEF
101: LGNSSGQPYT VHTNVYSQGK GNKEQQFRLW FDPTSSFHTY SIVWNSQRII FLVDNIPIRV FNNHEALGVA FPKNQAMRVY ASLWNADDWA TQGGRVKTDW
201: SMAPFTASYR NFNTNACVWS AATSTSSCGG SKTESVNNDQ TWQTQQLNAN GRNRLRWVQQ KYMIYNYCAD ANRFSQGFSP ECKRSRF
Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.