Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g031800.2.1 | Tomato | extracellular | 96.95 | 96.95 |
| KRG91233 | Soybean | extracellular | 78.98 | 77.41 |
| KRH35587 | Soybean | extracellular | 78.31 | 76.49 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 74.58 | 73.33 |
| Bra019846.1-P | Field mustard | extracellular | 73.56 | 72.58 |
| CDX97967 | Canola | extracellular | 73.56 | 72.58 |
| CDY49788 | Canola | extracellular | 73.22 | 72.24 |
| PGSC0003DMT400005342 | Potato | extracellular | 72.54 | 71.81 |
| AT1G11545.1 | Thale cress | extracellular | 72.88 | 70.49 |
| GSMUA_Achr1P08500_001 | Banana | extracellular | 63.39 | 69.0 |
| TraesCS2D01G224300.1 | Wheat | extracellular | 63.05 | 61.18 |
| TraesCS2B01G244500.1 | Wheat | extracellular | 63.39 | 61.11 |
| KXG36371 | Sorghum | extracellular | 61.36 | 56.74 |
| Zm00001d021667_P001 | Maize | plasma membrane | 61.36 | 54.85 |
| HORVU2Hr1G045330.4 | Barley | extracellular, vacuole | 62.71 | 49.87 |
| PGSC0003DMT400028324 | Potato | vacuole | 47.12 | 47.12 |
| PGSC0003DMT400036329 | Potato | extracellular | 44.41 | 46.45 |
| PGSC0003DMT400055138 | Potato | extracellular | 46.1 | 46.1 |
| PGSC0003DMT400005591 | Potato | extracellular | 46.1 | 45.95 |
| PGSC0003DMT400063689 | Potato | vacuole | 45.76 | 45.61 |
| PGSC0003DMT400026398 | Potato | extracellular | 43.73 | 45.58 |
| PGSC0003DMT400038413 | Potato | extracellular | 43.39 | 44.76 |
| PGSC0003DMT400067358 | Potato | extracellular | 44.75 | 44.59 |
| PGSC0003DMT400048241 | Potato | extracellular | 43.05 | 44.56 |
| PGSC0003DMT400056316 | Potato | extracellular | 41.02 | 43.84 |
| PGSC0003DMT400005949 | Potato | cytosol | 28.81 | 43.81 |
| PGSC0003DMT400013128 | Potato | extracellular | 23.39 | 43.12 |
| PGSC0003DMT400048242 | Potato | extracellular | 40.34 | 42.65 |
| PGSC0003DMT400020314 | Potato | cytosol, nucleus, peroxisome | 39.32 | 42.34 |
| PGSC0003DMT400011902 | Potato | extracellular | 40.0 | 42.29 |
| PGSC0003DMT400044559 | Potato | extracellular | 40.0 | 40.69 |
| PGSC0003DMT400079856 | Potato | extracellular | 39.32 | 40.42 |
| PGSC0003DMT400020122 | Potato | extracellular | 39.66 | 40.34 |
| PGSC0003DMT400044562 | Potato | extracellular | 38.98 | 40.07 |
| PGSC0003DMT400048240 | Potato | golgi | 42.03 | 36.26 |
Protein Annotations
| EntrezGene:102592757 | Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 |
| UniProt:M1C846 | PFAM:PF00722 | PFAM:PF06955 | EnsemblPlantsGene:PGSC0003DMG400024060 | PGSC:PGSC0003DMG400024060 | EnsemblPlants:PGSC0003DMT400061841 |
| PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF1 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI0002969A5D | InterPro:XET_C | RefSeq:XP_006343299.1 | InterPro:XTH |
Description
Xyloglucan endotransglucosylase/hydrolase protein A [Source:PGSC_GENE;Acc:PGSC0003DMG400024060]
Coordinates
chr3:+:2691665..2694463
Molecular Weight (calculated)
34620.2 Da
IEP (calculated)
5.171
GRAVY (calculated)
-0.611
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSIAHFLV FSAIIVVHFS STQAEVQGSF DDNFSKSCPE THFKTSEDGQ IWYLSLDKKA GCGFMTKQKY RFGWFSMKLK LVGGDSAGVV TAYYMCTEDG
101: AGPTRDELDF EFLGNRTGEP YLIQTNVYKN GTGNREMRHV LWFDPTEDFH TYSILWNTHQ IVFFVDRVPI RVYKNANYTN NFFPNEKPMY LFSSIWNADD
201: WATRGGLEKT NWKNQPFVSS YKDFNVDGCQ WKDPYPSCVS TTTQNWWDQY DSWHLSSDQK LDYSWVQRNL VIYDYCQDTE RFPKKPEECW LNPWE
101: AGPTRDELDF EFLGNRTGEP YLIQTNVYKN GTGNREMRHV LWFDPTEDFH TYSILWNTHQ IVFFVDRVPI RVYKNANYTN NFFPNEKPMY LFSSIWNADD
201: WATRGGLEKT NWKNQPFVSS YKDFNVDGCQ WKDPYPSCVS TTTQNWWDQY DSWHLSSDQK LDYSWVQRNL VIYDYCQDTE RFPKKPEECW LNPWE
001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA
Arabidopsis Description
XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.