Factsheet for Bra019846.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97967	Canola	extracellular	100.0	100.0
AT1G11545.1	Thale cress	extracellular	92.31	90.49
KRG91233	Soybean	extracellular	78.6	78.07
KRH35587	Soybean	extracellular	77.26	76.49
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	74.92	74.67
PGSC0003DMT400061841	Potato	extracellular	72.58	73.56
Solyc03g031800.2.1	Tomato	extracellular	71.91	72.88
Solyc10g005350.2.1	Tomato	extracellular	69.23	71.88
GSMUA_Achr1P08500_001	Banana	extracellular	60.87	67.16
PGSC0003DMT400005342	Potato	extracellular	65.22	65.44
Solyc02g080160.2.1	Tomato	extracellular	63.55	63.76
TraesCS2D01G224300.1	Wheat	extracellular	63.55	62.5
TraesCS2B01G244500.1	Wheat	extracellular	63.55	62.09
KXG36371	Sorghum	extracellular	61.54	57.68
Zm00001d021667_P001	Maize	plasma membrane	62.21	56.36
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	47.83	51.25
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	62.54	50.4
Bra006220.1-P	Field mustard	vacuole	48.49	49.49
Bra013164.1-P	Field mustard	extracellular	47.83	48.47
Bra024415.1-P	Field mustard	extracellular	45.48	47.72
Bra000840.1-P	Field mustard	extracellular	44.48	45.86
Bra017855.1-P	Field mustard	extracellular, vacuole	44.15	45.21
Bra020436.1-P	Field mustard	extracellular	41.81	44.17
Bra024089.1-P	Field mustard	extracellular	41.14	44.09
Bra002723.1-P	Field mustard	extracellular	42.14	44.06
Bra008806.1-P	Field mustard	extracellular	42.14	43.9
Bra013922.1-P	Field mustard	extracellular	42.14	43.9
Bra020434.1-P	Field mustard	extracellular	41.81	43.86
Bra040716.1-P	Field mustard	vacuole	43.14	43.43
Bra013923.1-P	Field mustard	extracellular	41.14	43.31
Bra014975.1-P	Field mustard	extracellular, vacuole	42.14	43.3
Bra002719.1-P	Field mustard	extracellular	40.8	43.11
Bra019141.1-P	Field mustard	extracellular	41.14	43.01
Bra002722.1-P	Field mustard	extracellular	40.8	42.96
Bra011179.1-P	Field mustard	extracellular	40.47	42.91
Bra020432.1-P	Field mustard	extracellular	40.47	42.76
Bra038442.1-P	Field mustard	extracellular	41.14	42.56
Bra020433.1-P	Field mustard	extracellular	36.12	41.54
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	33.11	41.42
Bra006814.1-P	Field mustard	extracellular	41.81	39.19
Bra034193.1-P	Field mustard	cytosol	44.82	38.95
Bra011066.1-P	Field mustard	extracellular	37.79	38.7

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	EnsemblPlantsGene:Bra019846	EnsemblPlants:Bra019846.1	EnsemblPlants:Bra019846.1-P
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	UniProt:M4DTK3	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253EB83	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

AT1G11545 (E=8e-171) | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative

Coordinates

chrA06:-:4023255..4024487

Molecular Weight (calculated)

35030.0 Da

IEP (calculated)

5.394

GRAVY (calculated)

-0.543

Length

299 amino acids

Sequence
(BLAST)

001: MEKRYSSMAA VLFFVAALMV SSSITAVPTQ SFEENFNIMW SENHFTTSED GQIWNLALDN DTGCGFQTKH MYRFGWFSMK LKLVGGDSAG VVTAYYMCSE
101: NGAGPERDEI DFEFLGNRTG EPYIIQTNVF KNGTGNREMR HSLWFDPTKD YHTYSILWNN HQLVFFVDRV PIRVYKNSDK VPNNDFFPNQ KPMYLFSSIW
201: NADDWATRGG LEKTDWKKAP FVSSYKDFAV EGCRWKDPFP ACVSTTTENW WDQYDAWHLS KTQKMDYAWV QRNLVVYDYC QDRERFPKMP WECSISPWA

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.