Factsheet for Bra002722.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67778	Canola	extracellular	99.3	99.3
CDY25904	Canola	extracellular	98.24	98.24
Bra020434.1-P	Field mustard	extracellular	88.73	88.42
AT5G57550.1	Thale cress	extracellular	86.27	86.27
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	50.35	74.09
GSMUA_Achr3P05220_001	Banana	cytosol	51.41	70.19
GSMUA_Achr10P...	Banana	cytosol	48.94	69.85
GSMUA_Achr7P16430_001	Banana	cytosol	51.76	69.01
GSMUA_Achr9P13820_001	Banana	cytosol	49.65	67.46
GSMUA_Achr5P21880_001	Banana	cytosol	49.3	65.73
Bra002719.1-P	Field mustard	extracellular	65.49	65.72
HORVU7Hr1G098320.3	Barley	vacuole	66.2	65.05
TraesCS7D01G419300.1	Wheat	extracellular	65.85	64.48
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	66.2	64.38
TraesCS7A01G426100.1	Wheat	vacuole	65.49	64.36
Bra008806.1-P	Field mustard	extracellular	64.79	64.11
TraesCS7A01G427000.1	Wheat	extracellular	64.44	63.99
Bra013922.1-P	Field mustard	extracellular	64.44	63.76
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	50.0	63.68
TraesCS7A01G426900.1	Wheat	extracellular	64.08	63.64
Bra011179.1-P	Field mustard	extracellular	63.03	63.48
Bra024089.1-P	Field mustard	extracellular	62.32	63.44
TraesCS7D01G419100.1	Wheat	extracellular	64.08	63.19
TraesCS7A01G426600.1	Wheat	vacuole	64.44	63.1
Bra020433.1-P	Field mustard	extracellular	57.75	63.08
TraesCS7B01G326900.1	Wheat	extracellular	64.08	62.98
TraesCS7B01G327200.1	Wheat	extracellular	63.38	62.94
TraesCS7D01G419200.1	Wheat	extracellular	63.38	62.94
Solyc07g006870.2.1	Tomato	extracellular, vacuole	62.32	62.77
TraesCS7B01G327000.1	Wheat	extracellular	64.44	62.67
HORVU7Hr1G098260.1	Barley	vacuole	64.44	62.67
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.31	62.44
TraesCS7A01G426700.1	Wheat	extracellular	63.38	62.28
PGSC0003DMT400048242	Potato	extracellular	60.92	62.01
Os06t0697000-02	Rice	extracellular	63.03	61.72
Zm00001d014617_P001	Maize	extracellular	63.73	60.74
EER90303	Sorghum	extracellular, golgi, vacuole	64.08	60.47
Bra038442.1-P	Field mustard	extracellular	60.92	59.86
Bra013923.1-P	Field mustard	extracellular	59.51	59.51
Bra002723.1-P	Field mustard	extracellular	59.15	58.74
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	48.94	58.16
HORVU7Hr1G098440.2	Barley	extracellular	58.45	58.04
TraesCS7D01G418600.1	Wheat	vacuole	65.14	57.99
Bra020436.1-P	Field mustard	extracellular	57.75	57.95
TraesCS7D01G419900.1	Wheat	extracellular	58.45	57.84
TraesCS7A01G427600.1	Wheat	extracellular	58.45	57.44
Bra014975.1-P	Field mustard	extracellular, vacuole	58.8	57.39
Bra019141.1-P	Field mustard	extracellular	57.75	57.34
Bra020432.1-P	Field mustard	extracellular	57.04	57.24
EER88885	Sorghum	extracellular	58.8	57.19
Os06t0696400-01	Rice	extracellular	58.8	57.0
TraesCS7B01G327700.1	Wheat	extracellular	58.1	56.9
Zm00001d014613_P001	Maize	plasma membrane	57.39	56.21
Zm00001d009309_P001	Maize	extracellular, vacuole	53.17	54.51
Bra006814.1-P	Field mustard	extracellular	58.45	52.04
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	47.54	48.39
Bra006220.1-P	Field mustard	vacuole	48.59	47.1
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	65.14	46.25
Bra013164.1-P	Field mustard	extracellular	47.54	45.76
Bra024415.1-P	Field mustard	extracellular	45.77	45.61
Bra000840.1-P	Field mustard	extracellular	45.77	44.83
Bra017855.1-P	Field mustard	extracellular, vacuole	45.77	44.52
Bra011066.1-P	Field mustard	extracellular	45.07	43.84
Bra019846.1-P	Field mustard	extracellular	42.96	40.8
Bra040716.1-P	Field mustard	vacuole	42.61	40.74
Bra034193.1-P	Field mustard	cytosol	44.72	36.92

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra002722	EnsemblPlants:Bra002722.1	EnsemblPlants:Bra002722.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4CEU0	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002544F92	InterPro:XET_C	InterPro:XTH	:	:	:

Description

AT5G57550 (E=2e-146) XTR3 | XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA10:-:7999269..8000613

Molecular Weight (calculated)

32580.6 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.466

Length

284 amino acids

Sequence
(BLAST)

001: MDRHSTLILS ILLNALTTTF FSPVYAGTFD REFDITWGGG RGKVLNNGEL LTLSLDRASG SGFQSKKESL FGKIDMQIKL VPGNSAGTVT TYYLKSKGDT
101: WDEIDFEFLG NLTGDPYVMH TNVYTQGKGD REQQFHLWFD PTADFHTYSV LWNHHHIVFL VDGIPIRQFK NLEHRRIPYP KMQPMRLYSS LWNADQWATR
201: GGLVKTDWSK APFTASYRNF RADACVSYTG KPSCPAGSPR WLSHRFDLTA ENNMRVVQRK FMVYNYCTDS KRFPQGFPKE CGIH

Best Arabidopsis Sequence Match ( AT5G57550.1 )
(BLAST)

001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH

Arabidopsis Description

XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.