Factsheet for GSMUA_Achr5P21880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16430_001	Banana	cytosol	91.08	91.08
GSMUA_Achr10P...	Banana	cytosol	82.16	87.94
GSMUA_Achr3P05220_001	Banana	cytosol	85.45	87.5
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	78.87	87.05
GSMUA_Achr9P13820_001	Banana	cytosol	84.04	85.65
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	69.48	75.13
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	73.71	70.4
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	65.73	66.35
TraesCS7D01G419200.1	Wheat	extracellular	74.18	55.24
TraesCS7A01G426900.1	Wheat	extracellular	74.18	55.24
HORVU7Hr1G098320.3	Barley	vacuole	74.65	55.02
TraesCS7B01G327200.1	Wheat	extracellular	73.71	54.9
TraesCS7D01G419100.1	Wheat	extracellular	74.18	54.86
TraesCS7A01G426100.1	Wheat	vacuole	74.18	54.67
TraesCS7A01G427000.1	Wheat	extracellular	73.24	54.55
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	74.65	54.45
Os06t0697000-02	Rice	extracellular	73.71	54.14
TraesCS7D01G419300.1	Wheat	extracellular	73.71	54.14
TraesCS7B01G326900.1	Wheat	extracellular	73.24	53.98
GSMUA_Achr10P...	Banana	extracellular	71.36	53.9
TraesCS7A01G426600.1	Wheat	vacuole	73.24	53.79
TraesCS7A01G426700.1	Wheat	extracellular	72.77	53.63
VIT_11s0052g01230.t01	Wine grape	cytosol	69.95	53.6
TraesCS7B01G327000.1	Wheat	extracellular	73.24	53.42
CDY02738	Canola	extracellular, nucleus, vacuole	53.52	53.02
HORVU7Hr1G098260.1	Barley	vacuole	72.3	52.74
EER90303	Sorghum	extracellular, golgi, vacuole	74.18	52.49
Zm00001d014617_P001	Maize	extracellular	73.24	52.35
Os06t0696400-01	Rice	extracellular	71.83	52.22
HORVU7Hr1G098440.2	Barley	extracellular	69.48	51.75
GSMUA_Achr6P30850_001	Banana	extracellular	68.08	51.42
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	67.61	51.25
TraesCS7D01G419900.1	Wheat	extracellular	69.01	51.22
TraesCS7A01G427600.1	Wheat	extracellular	69.48	51.21
AT5G57550.1	Thale cress	extracellular	68.08	51.06
TraesCS7B01G327700.1	Wheat	extracellular	69.48	51.03
GSMUA_Achr10P...	Banana	extracellular	68.54	50.69
Zm00001d014613_P001	Maize	plasma membrane	68.54	50.34
EER88885	Sorghum	extracellular	69.01	50.34
Bra020434.1-P	Field mustard	extracellular	67.14	50.18
Solyc07g006870.2.1	Tomato	extracellular, vacuole	66.2	50.0
PGSC0003DMT400048242	Potato	extracellular	65.26	49.82
Bra002722.1-P	Field mustard	extracellular	65.73	49.3
CDY67778	Canola	extracellular	65.73	49.3
AT5G57530.1	Thale cress	extracellular	65.73	49.12
CDY11863	Canola	extracellular	65.73	48.95
CDY25904	Canola	extracellular	65.26	48.94
TraesCS7D01G418600.1	Wheat	vacuole	73.24	48.9
CDY67488	Canola	extracellular	64.79	48.76
Bra020436.1-P	Field mustard	extracellular	64.79	48.76
CDX88627	Canola	extracellular	65.26	48.6
AT5G57540.1	Thale cress	extracellular	64.79	48.59
CDY67779	Canola	extracellular	64.79	48.25
Bra002723.1-P	Field mustard	extracellular	64.79	48.25
Zm00001d009309_P001	Maize	extracellular, vacuole	61.97	47.65
Bra013923.1-P	Field mustard	extracellular	62.91	47.18
CDY69806	Canola	extracellular	62.91	47.18
Bra019141.1-P	Field mustard	extracellular	62.91	46.85
CDY50186	Canola	extracellular	62.91	46.85
AT4G25820.1	Thale cress	extracellular	62.91	46.69
CDX92733	Canola	extracellular	62.44	46.5
GSMUA_Achr8P34300_001	Banana	cytosol	58.22	45.26
GSMUA_Achr8P19740_001	Banana	extracellular	55.87	44.24
Bra006814.1-P	Field mustard	extracellular	65.26	43.57
GSMUA_Achr3P03390_001	Banana	extracellular	60.09	43.54
PGSC0003DMT400048240	Potato	golgi	64.79	40.35
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	50.23	40.07
GSMUA_Achr8P26470_001	Banana	extracellular	53.52	39.86
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	49.77	39.26
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	73.71	39.25
GSMUA_Achr7P10940_001	Banana	extracellular	51.17	39.21
Solyc07g006850.1.1	Tomato	golgi	62.91	39.18
GSMUA_Achr8P05120_001	Banana	extracellular	52.58	39.16
GSMUA_Achr3P26220_001	Banana	extracellular	52.11	38.81
GSMUA_Achr1P08500_001	Banana	extracellular	49.3	38.75
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	53.05	38.31
GSMUA_Achr5P19320_001	Banana	vacuole	50.7	38.03
GSMUA_Achr1P14290_001	Banana	vacuole	50.7	36.49
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	49.3	23.76

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr5G21880_001	EnsemblPlants:GSMUA_Achr5P21880_001	EnsemblPlants:GSMUA_Achr5T21880_001
InterPro:IPR000757	UniProt:M0T0L3	PFAM:PF00722	PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF100	SUPFAM:SSF49899	UniParc:UPI000295B411	InterPro:XET_C	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:GMGC_GENE;Acc:GSMUA_Achr5G21880_001]

Coordinates

chr5:+:24028950..24030181

Molecular Weight (calculated)

24267.4 Da

IEP (calculated)

6.918

GRAVY (calculated)

-0.559

Length

213 amino acids

Sequence
(BLAST)

001: MQIKLVPGNS AGTVTAYYLS SQGPTHDEID FEFLGNLSGD PYTLHTNVFT QGKGNREMQF KLWFDPTDDF HTYSILWNPR HVIFMVDGTP IRDFKNLESR
101: GIAFPNSQPM RIYSSLWNAD DWATRGGLVK TDWSRAPFTA SYRNFKANTC VPSSATSECA SNSVPSNGGW WNQELDSMGQ QRMKWVQKNY MIYNYCSDLK
201: RFPQGLPPEC SIA

Best Arabidopsis Sequence Match ( AT4G14130.1 )
(BLAST)

001: MGPSSSLTTI VATVLLVTLF GSAYASNFFD EFDLTWGDHR GKIFNGGNML SLSLDQVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTA YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV

Arabidopsis Description

XTH15Xyloglucan endotransglucosylase/hydrolase protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q38911]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.