Factsheet for GSMUA_Achr8P15560_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	63.51	69.43
GSMUA_Achr10P...	Banana	cytosol	64.45	68.34
GSMUA_Achr9P13820_001	Banana	cytosol	67.3	67.94
GSMUA_Achr3P05220_001	Banana	cytosol	65.88	66.83
GSMUA_Achr5P21880_001	Banana	cytosol	66.35	65.73
GSMUA_Achr7P16430_001	Banana	cytosol	65.88	65.26
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	83.41	62.63
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	54.98	58.88
GSMUA_Achr10P...	Banana	extracellular	70.14	52.48
GSMUA_Achr6P30850_001	Banana	extracellular	69.19	51.77
GSMUA_Achr10P...	Banana	extracellular	67.77	49.65
GSMUA_Achr8P34300_001	Banana	cytosol	58.77	45.26
GSMUA_Achr8P19740_001	Banana	extracellular	57.35	44.98
GSMUA_Achr7P10940_001	Banana	extracellular	57.35	43.53
GSMUA_Achr3P03390_001	Banana	extracellular	59.24	42.52
GSMUA_Achr5P19320_001	Banana	vacuole	54.5	40.49
GSMUA_Achr8P05120_001	Banana	extracellular	54.03	39.86
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	50.24	39.26
GSMUA_Achr3P26220_001	Banana	extracellular	53.08	39.16
GSMUA_Achr8P26470_001	Banana	extracellular	52.61	38.81
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	48.82	38.58
GSMUA_Achr1P14290_001	Banana	vacuole	53.55	38.18
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	53.08	37.97
GSMUA_Achr1P08500_001	Banana	extracellular	47.87	37.27
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	48.34	23.08

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0048046
GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr8G15560_001	EnsemblPlants:GSMUA_Achr8P15560_001	EnsemblPlants:GSMUA_Achr8T15560_001	InterPro:IPR000757	UniProt:M0TQQ9
PFAM:PF00722	PFAM:PF06955	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20
SUPFAM:SSF49899	UniParc:UPI000295AE9B	InterPro:XET_C	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase protein 22 [Source:GMGC_GENE;Acc:GSMUA_Achr8G15560_001]

Coordinates

chr8:+:13185088..13186576

Molecular Weight (calculated)

23949.9 Da

IEP (calculated)

6.763

GRAVY (calculated)

-0.533

Length

211 amino acids

Sequence
(BLAST)

001: MKMKLVPGNS AGTVTTYYLS SLGPTHDEID FEFLGNVSGE PYVLHTNVYS QGKGDKEQQF YLWFDPRLAF HTYSILWNPQ QIVFYVDGTP IRVFRNSESL
101: GVPYPKSQAM RLYASLWDGD DWATRGGLVK TDWSQAPFVA SYQGYAADAC VSSAGRPSCS PSRGNWWDQG LDSGALQKLK WVRDNYMIYD YCRDTKRFPQ
201: GFPPECSSPR N

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.