Factsheet for GSMUA_Achr10P23460_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30850_001	Banana	extracellular	77.78	79.43
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	50.0	74.61
GSMUA_Achr10P...	Banana	cytosol	50.35	72.86
GSMUA_Achr9P13820_001	Banana	cytosol	52.78	72.73
GSMUA_Achr10P...	Banana	extracellular	70.83	72.34
GSMUA_Achr3P05220_001	Banana	cytosol	51.74	71.63
GSMUA_Achr7P16430_001	Banana	cytosol	52.08	70.42
GSMUA_Achr5P21880_001	Banana	cytosol	50.69	68.54
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	49.65	67.77
KRH19006	Soybean	vacuole	68.4	67.24
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	63.54	65.12
KRH02889	Soybean	extracellular	65.62	64.95
Os06t0696600-01	Rice	extracellular	64.24	64.24
Solyc07g006860.2.1	Tomato	extracellular	63.19	63.86
PGSC0003DMT400048241	Potato	extracellular	62.85	63.51
TraesCS7B01G327400.1	Wheat	extracellular	62.5	63.16
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.06	62.94
HORVU7Hr1G098370.1	Barley	extracellular	62.15	62.81
TraesCS7A01G427100.1	Wheat	extracellular	61.81	62.46
TraesCS7D01G419400.1	Wheat	vacuole	62.15	62.37
TraesCS7A01G427300.1	Wheat	extracellular	61.46	62.11
EER90302	Sorghum	extracellular	61.46	61.46
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	47.22	56.9
AT2G18800.1	Thale cress	extracellular	60.07	56.72
CDY49308	Canola	extracellular	60.76	55.73
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	59.03	51.99
GSMUA_Achr8P34300_001	Banana	cytosol	48.26	50.73
GSMUA_Achr8P19740_001	Banana	extracellular	46.53	49.81
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	45.14	48.69
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	44.79	47.78
GSMUA_Achr3P03390_001	Banana	extracellular	48.61	47.62
GSMUA_Achr8P26470_001	Banana	extracellular	46.53	46.85
GSMUA_Achr8P05120_001	Banana	extracellular	46.53	46.85
GSMUA_Achr3P26220_001	Banana	extracellular	46.18	46.5
Zm00001d014614_P001	Maize	nucleus, plastid	60.76	46.42
Zm00001d014615_P002	Maize	extracellular	60.76	46.42
GSMUA_Achr7P10940_001	Banana	extracellular	44.1	45.68
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	46.53	45.42
GSMUA_Achr5P19320_001	Banana	vacuole	44.1	44.72
GSMUA_Achr1P08500_001	Banana	extracellular	42.01	44.65
GSMUA_Achr1P14290_001	Banana	vacuole	43.4	42.23
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	45.14	29.41

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr10G23460_001	EnsemblPlants:GSMUA_Achr10P23460_001
EnsemblPlants:GSMUA_Achr10T23460_001	InterPro:IPR000757	UniProt:M0RKS1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF63	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296E8D9	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

Xyloglucan endotransglucosylase/hydrolase protein 22 [Source:GMGC_GENE;Acc:GSMUA_Achr10G23460_001]

Coordinates

chr10:-:28203079..28204085

Molecular Weight (calculated)

32205.6 Da

IEP (calculated)

6.352

GRAVY (calculated)

-0.290

Length

288 amino acids

Sequence
(BLAST)

001: MASFSSCNKT DLFLLLALLS ASASAAASAV SFYRDVDITW GDGRAKVLDN GRLLTLSLDQ SSGSGFQSKN RYVYGTFDVQ LKLVPGNSAG TVTTFYLSSE
101: GVMHDEIDLE FLGNLSGDPY VLHTNVFSQG KGNREQQFFL WFDPTKNFHT YSVLWNPKHI VFYVDGTPIR EFKNRESTGV PYPTNQAMRI YSSLWDADDW
201: ATRGGLVKTD WSKAPFTAAF RSFDADGCLW TSGASSCSSG SSSWMWQELD ATSLKKMRWV QHNYMIYDYC ADAKRFPQGL PLECSARP

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.