Factsheet for GSMUA_Achr8P34300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	82.12	80.65
TraesCSU01G175000.1	Wheat	vacuole	83.94	78.23
TraesCS4A01G172600.1	Wheat	unclear	83.94	78.23
TraesCS4D01G142800.1	Wheat	extracellular	83.58	77.89
Os11t0539200-01	Rice	extracellular	83.21	77.29
Bra006220.1-P	Field mustard	vacuole	82.12	76.79
CDX69621	Canola	vacuole	82.12	76.79
CDY09832	Canola	vacuole	81.75	76.45
AT5G13870.2	Thale cress	extracellular, vacuole	81.39	76.11
Zm00001d052651_P001	Maize	extracellular	82.48	76.09
CDX78542	Canola	vacuole	82.12	75.5
CDX70524	Canola	vacuole	81.75	75.17
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	82.85	75.17
VIT_01s0150g00460.t01	Wine grape	extracellular	83.94	74.92
KRG94750	Soybean	endoplasmic reticulum	80.66	74.92
OQU83588	Sorghum	extracellular	82.12	74.26
KRH06776	Soybean	endoplasmic reticulum	79.56	73.9
CDY69237	Canola	extracellular	78.1	72.54
KRH70105	Soybean	nucleus	81.75	72.49
PGSC0003DMT400005591	Potato	extracellular	78.1	72.3
CDX93096	Canola	extracellular	77.74	72.2
Bra013164.1-P	Field mustard	extracellular	77.74	72.2
AT2G06850.1	Thale cress	extracellular	77.74	71.96
Solyc11g040140.1.1	Tomato	extracellular	78.47	71.67
KRG94748	Soybean	extracellular, vacuole	63.87	67.57
KRH06775	Soybean	endoplasmic reticulum	81.39	64.64
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	43.8	62.18
GSMUA_Achr10P...	Banana	cytosol	43.8	60.3
GSMUA_Achr3P05220_001	Banana	cytosol	45.26	59.62
GSMUA_Achr9P13820_001	Banana	cytosol	44.89	58.85
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	45.26	58.77
GSMUA_Achr7P16430_001	Banana	cytosol	45.62	58.69
GSMUA_Achr5P21880_001	Banana	cytosol	45.26	58.22
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	39.78	55.33
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	53.65	52.31
GSMUA_Achr8P05120_001	Banana	extracellular	52.55	50.35
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	54.01	50.17
GSMUA_Achr8P26470_001	Banana	extracellular	51.82	49.65
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	48.18	49.44
GSMUA_Achr10P...	Banana	extracellular	50.73	49.29
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	48.54	49.26
GSMUA_Achr3P26220_001	Banana	extracellular	51.09	48.95
GSMUA_Achr10P...	Banana	extracellular	50.73	48.26
GSMUA_Achr1P08500_001	Banana	extracellular	47.45	47.97
GSMUA_Achr5P19320_001	Banana	vacuole	49.27	47.54
GSMUA_Achr6P30850_001	Banana	extracellular	47.45	46.1
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	70.8	43.89
GSMUA_Achr1P14290_001	Banana	vacuole	46.35	42.91
GSMUA_Achr8P19740_001	Banana	extracellular	41.61	42.38
GSMUA_Achr7P10940_001	Banana	extracellular	42.34	41.73
GSMUA_Achr3P03390_001	Banana	extracellular	42.7	39.8

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr8G34300_001	EnsemblPlants:GSMUA_Achr8P34300_001	EnsemblPlants:GSMUA_Achr8T34300_001
InterPro:IPR000757	UniProt:M0TW32	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	SUPFAM:SSF49899	UniParc:UPI00029664AC	InterPro:XET_C
InterPro:XTH	:	:	:	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase [Source:GMGC_GENE;Acc:GSMUA_Achr8G34300_001]

Coordinates

chr8:+:35173235..35174409

Molecular Weight (calculated)

31940.2 Da

IEP (calculated)

6.305

GRAVY (calculated)

-0.649

Length

274 amino acids

Sequence
(BLAST)

001: MAATPRRAID VPFQKNYVPT WAFDHISYFN GGDEVQLCLD KSTGTGFQSR GSYLFGHFSM HIKMVPGDSA GTVTAFYLSS QNSEHDEIDF EFLGNRTDQP
101: YILQTNVFSG GKGDREQRIY LWFDPTKDYH SYSVLWNMHQ IVFFVDDVPI RVFKNSKDLG VKYPFNQPMK IYSSLWNADD WATRGGLEKT DWSRAPFVAS
201: YRGFHIDGCE ASADAKFCAT QGMQWWDQKE FQDLDGPQYR RLQWVRQKYT IYNYCADQSR YPTMPPECHR DRDV

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.