Factsheet for Bra013164.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93096	Canola	extracellular	99.66	99.66
CDY69237	Canola	extracellular	98.64	98.64
AT2G06850.1	Thale cress	extracellular	95.93	95.61
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	75.59	79.93
GSMUA_Achr8P34300_001	Banana	cytosol	72.2	77.74
Bra006220.1-P	Field mustard	vacuole	75.93	76.45
KRG94750	Soybean	endoplasmic reticulum	73.9	73.9
TraesCS4D01G142800.1	Wheat	extracellular	73.56	73.81
TraesCS4A01G172600.1	Wheat	unclear	73.56	73.81
KRH06776	Soybean	endoplasmic reticulum	73.56	73.56
TraesCSU01G175000.1	Wheat	vacuole	73.22	73.47
Zm00001d052651_P001	Maize	extracellular	72.54	72.05
PGSC0003DMT400005591	Potato	extracellular	71.86	71.62
Os11t0539200-01	Rice	extracellular	71.53	71.53
OQU83588	Sorghum	extracellular	73.22	71.29
KRH70105	Soybean	nucleus	74.58	71.2
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	72.88	71.19
Solyc11g040140.1.1	Tomato	extracellular	71.53	70.33
KRG94748	Soybean	extracellular, vacuole	60.34	68.73
KRH06775	Soybean	endoplasmic reticulum	74.24	63.48
Bra038442.1-P	Field mustard	extracellular	49.15	50.17
Bra011179.1-P	Field mustard	extracellular	47.12	49.29
Bra014975.1-P	Field mustard	extracellular, vacuole	48.47	49.14
Bra020436.1-P	Field mustard	extracellular	47.12	49.12
Bra024089.1-P	Field mustard	extracellular	46.1	48.75
Bra013922.1-P	Field mustard	extracellular	47.12	48.43
Bra008806.1-P	Field mustard	extracellular	47.12	48.43
Bra000840.1-P	Field mustard	extracellular	47.46	48.28
Bra002723.1-P	Field mustard	extracellular	46.78	48.25
Bra019846.1-P	Field mustard	extracellular	48.47	47.83
Bra002722.1-P	Field mustard	extracellular	45.76	47.54
Bra024415.1-P	Field mustard	extracellular	45.76	47.37
Bra020434.1-P	Field mustard	extracellular	45.76	47.37
Bra002719.1-P	Field mustard	extracellular	45.42	47.35
Bra017855.1-P	Field mustard	extracellular, vacuole	46.78	47.26
Bra013923.1-P	Field mustard	extracellular	45.08	46.83
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	37.29	46.03
Bra019141.1-P	Field mustard	extracellular	44.41	45.8
Bra020433.1-P	Field mustard	extracellular	40.34	45.77
Bra020432.1-P	Field mustard	extracellular	43.05	44.88
Bra006814.1-P	Field mustard	extracellular	45.76	42.32
Bra040716.1-P	Field mustard	vacuole	42.37	42.09
Bra011066.1-P	Field mustard	extracellular	40.34	40.75
Bra034193.1-P	Field mustard	cytosol	46.1	39.53
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	58.64	39.14

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	EnsemblPlantsGene:Bra013164	EnsemblPlants:Bra013164.1	EnsemblPlants:Bra013164.1-P
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009506
GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009612	GO:GO:0009628	GO:GO:0009645
GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009826	GO:GO:0009987	GO:GO:0010411
GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0040007	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4D9K4	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	SUPFAM:SSF49899	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002540983	InterPro:XET_C	InterPro:XTH	:	:

Description

AT2G06850 (E=1e-173) EXGT-A1, EXT | EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA03:-:20104122..20105879

Molecular Weight (calculated)

34064.5 Da

IEP (calculated)

8.999

GRAVY (calculated)

-0.371

Length

295 amino acids

Sequence
(BLAST)

001: MAVSSTPWAL VALFLMASST VMAIPPRKAI DVPFGRNYVP TWAFDHQKQL NGGSELQLIL DKYTGTGFQS KGSYLFGHFS MHIKLPAGDT AGVVTAFYLS
101: STNNEHDEID FEFLGNRTGQ PAILQTNVFT GGKGNREQRI YLWFDPSKAY HTYSILWNLY QIVFFVDNIP IRVFKNAKDL GVRFPFNQPM KLYSSLWNAD
201: DWATRGGLEK TNWANAPFIA SYRGFHIDGC QASVEAKYCA TQGRMWWDQN EFRDLDAEQY RRLKWVRMKW TIYNYCTDRT RFPVMPAECK RDRDV

Best Arabidopsis Sequence Match ( AT2G06850.1 )
(BLAST)

001: MTVSSSPWAL MALFLMVSST MVMAIPPRKA IDVPFGRNYV PTWAFDHQKQ FNGGSELQLI LDKYTGTGFQ SKGSYLFGHF SMHIKLPAGD TAGVVTAFYL
101: SSTNNEHDEI DFEFLGNRTG QPAILQTNVF TGGKGNREQR IYLWFDPSKA YHTYSILWNM YQIVFFVDNI PIRTFKNAKD LGVRFPFNQP MKLYSSLWNA
201: DDWATRGGLE KTNWANAPFV ASYKGFHIDG CQASVEAKYC ATQGRMWWDQ KEFRDLDAEQ WRRLKWVRMK WTIYNYCTDR TRFPVMPAEC KRDRDA

Arabidopsis Description

XTH4Xyloglucan endotransglucosylase/hydrolase protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39099]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.