Factsheet for Os11t0539200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 17951457

msms PMID: 17951457 doi

J Zhu, S Alvarez, EL Marsh, ME Lenoble, IJ Cho, M Sivaguru, S Chen, HT Nguyen, Y Wu, DP Schachtman, RE Sharp

Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G175000.1	Wheat	vacuole	86.44	86.73
TraesCS4D01G142800.1	Wheat	extracellular	86.44	86.73
TraesCS4A01G172600.1	Wheat	unclear	86.44	86.73
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	87.46	85.43
Zm00001d052651_P001	Maize	extracellular	85.76	85.19
GSMUA_Achr8P34300_001	Banana	cytosol	77.29	83.21
OQU83588	Sorghum	extracellular	85.42	83.17
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	71.86	75.99
AT5G13870.2	Thale cress	extracellular, vacuole	72.2	72.7
KRG94750	Soybean	endoplasmic reticulum	72.54	72.54
CDX69621	Canola	vacuole	71.86	72.35
CDY09832	Canola	vacuole	71.53	72.01
CDX93096	Canola	extracellular	71.86	71.86
CDY69237	Canola	extracellular	71.86	71.86
Bra013164.1-P	Field mustard	extracellular	71.53	71.53
VIT_01s0150g00460.t01	Wine grape	extracellular	74.24	71.34
Bra006220.1-P	Field mustard	vacuole	70.85	71.33
KRH06776	Soybean	endoplasmic reticulum	70.51	70.51
AT2G06850.1	Thale cress	extracellular	70.51	70.27
CDX70524	Canola	vacuole	70.85	70.13
CDX78542	Canola	vacuole	70.85	70.13
KRH70105	Soybean	nucleus	73.22	69.9
PGSC0003DMT400005591	Potato	extracellular	68.81	68.58
Solyc11g040140.1.1	Tomato	extracellular	68.14	67.0
KRG94748	Soybean	extracellular, vacuole	56.61	64.48
KRH06775	Soybean	endoplasmic reticulum	73.22	62.61
Os06t0696400-01	Rice	extracellular	48.47	48.81
Os06t0696600-01	Rice	extracellular	46.78	47.92
Os06t0697000-02	Rice	extracellular	46.1	46.9
Os04t0604200-01	Rice	extracellular	43.05	43.34
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	62.37	41.63
Os04t0604300-01	Rice	extracellular	38.98	41.07
Os04t0604900-01	Rice	extracellular, vacuole	44.41	40.81
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	11.86	40.23
Os04t0604800-00	Rice	extracellular	38.98	39.12
Os08t0237800-00	Rice	extracellular, vacuole	38.98	37.95
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	39.32	36.36
Os08t0240500-00	Rice	extracellular	27.12	34.93

Protein Annotations

Gene3D:2.60.120.200	EntrezGene:4350662	MapMan:50.2.4	ProteinID:ABA94104.1	EMBL:AK071574	ProteinID:BAF28396.1
ProteinID:BAT14325.1	InterPro:ConA-like_dom_sf	ProteinID:EAZ18626.1	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os11g0539200	EnsemblPlants:Os11t0539200-01
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF97	UniProt:Q2R336	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0000682103	InterPro:XET_C
RefSeq:XP_015615585.1	InterPro:XTH	SEG:seg	:	:	:

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 2Similar to Xyloglucan endotransglycosylase XET2 (Fragment). (Os11t0539200-01)

Coordinates

chr11:+:19675012..19677815

Molecular Weight (calculated)

33846.4 Da

IEP (calculated)

6.044

GRAVY (calculated)

-0.554

Length

295 amino acids

Sequence
(BLAST)

001: MATTTAAAMV VAMSVLLLGG GEAAAPRKPV DVAFEKNYVP TWAEDHIHYV DGGREVQLYL DKSTGTGFQT RGSYLFGHFS MHIKLVAGDS AGTVTAFYLS
101: SQNSEHDEID FEFLGNRTGE PYILQTNVFS GGKGDREQRI YLWFDPTKDY HSYSVLWNLY MIAFFVDDTP IRVFKNSKDL GVRYPFNQPM KLYSSLWNAD
201: DWATRGGREK TDWSRAPFVA SYRGFHVDGC EASAEARYCA TQGARWWDQP EFRDLDADQY RRLAWVRKTH TIYNYCDDRE RYPAMSPECH RDRDA

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.