Factsheet for Os04t0604800-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 24083427

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	70.41	69.93
TraesCS2A01G433700.1	Wheat	vacuole	70.07	69.59
HORVU2Hr1G101160.1	Barley	extracellular, vacuole	68.03	67.34
TraesCS2A01G433600.1	Wheat	vacuole	67.01	66.55
TraesCS2D01G431600.1	Wheat	vacuole	67.01	66.11
TraesCS2B01G454600.1	Wheat	vacuole	67.01	66.11
EES11382	Sorghum	extracellular, vacuole	64.63	63.76
Zm00001d026251_P001	Maize	extracellular	62.24	63.1
Os08t0237800-00	Rice	extracellular, vacuole	58.16	56.44
Os04t0604200-01	Rice	extracellular	53.06	53.24
Os04t0604300-01	Rice	extracellular	47.28	49.64
Os06t0697000-02	Rice	extracellular	45.58	46.21
Os06t0696400-01	Rice	extracellular	45.92	46.08
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	48.3	44.51
Os06t0696600-01	Rice	extracellular	43.54	44.44
Os08t0240500-00	Rice	extracellular	33.33	42.79
Os04t0604900-01	Rice	extracellular, vacuole	45.58	41.74
Os11t0539200-01	Rice	extracellular	39.12	38.98
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	10.2	34.48

Protein Annotations

Gene3D:2.60.120.200	EntrezGene:4336907	MapMan:50.2.4	UniProt:A3AX59	ProteinID:BAS90877.1	InterPro:Beta_glucanase
InterPro:ConA-like_dom_sf	ProteinID:EAZ31898.1	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os04g0604800	EnsemblPlants:Os04t0604800-00	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF38	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0000DD9262	InterPro:XET_C	RefSeq:XP_015634187.1
InterPro:XTH	SEG:seg	:	:	:	:

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 7Similar to OSIGBa0118P15.11 protein. (Os04t0604800-00)

Coordinates

chr4:+:30518927..30520167

Molecular Weight (calculated)

33392.1 Da

IEP (calculated)

4.399

GRAVY (calculated)

-0.274

Length

294 amino acids

Sequence
(BLAST)

001: MAPMPLASSS SKLCSLLILC LAFLAAVDRS TAGIFDEIEL IWGASRTYFF MDGDSEALAL SLDQSQGSCF RSREKYLYVQ IDVEIKLIEG DSAGTVCTIY
101: TISEGPWEIH DEIDLEFLGN VTGEPYTLHT NIFANGVGGR EQQFRLWFDP TADYHTYSIV WNPKRILILV DGKAIRDFKN NEDQGVPFPT WQSMRTFGSL
201: WSAEDWATQG GRVKTDWKQA PFVTYYRNYN VTWCRPSPGV AWCGDEPKDS TRFDLDANTL SDLQWVRSNS MIYNYCDDSV RFNATTLPKE CTLQ

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.