Factsheet for GSMUA_Achr7P02620_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P34300_001	Banana	cytosol	43.89	70.8
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	41.4	65.59
CDX69621	Canola	vacuole	42.31	63.82
TraesCSU01G175000.1	Wheat	vacuole	42.31	63.61
TraesCS4A01G172600.1	Wheat	unclear	42.31	63.61
AT5G13870.2	Thale cress	extracellular, vacuole	42.08	63.48
CDY09832	Canola	vacuole	42.08	63.48
TraesCS4D01G142800.1	Wheat	extracellular	42.08	63.27
Bra006220.1-P	Field mustard	vacuole	41.86	63.14
KRH06776	Soybean	endoplasmic reticulum	42.08	63.05
Zm00001d052651_P001	Maize	extracellular	42.31	62.96
OQU83588	Sorghum	extracellular	42.76	62.38
KRG94750	Soybean	endoplasmic reticulum	41.63	62.37
Os11t0539200-01	Rice	extracellular	41.63	62.37
VIT_01s0150g00460.t01	Wine grape	extracellular	43.21	62.22
CDX70524	Canola	vacuole	41.86	62.08
CDX78542	Canola	vacuole	41.86	62.08
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	41.86	61.26
KRH70105	Soybean	nucleus	42.53	60.84
CDY69237	Canola	extracellular	39.37	58.98
CDX93096	Canola	extracellular	39.14	58.64
Bra013164.1-P	Field mustard	extracellular	39.14	58.64
PGSC0003DMT400005591	Potato	extracellular	39.14	58.45
AT2G06850.1	Thale cress	extracellular	39.14	58.45
Solyc11g040140.1.1	Tomato	extracellular	39.14	57.67
KRG94748	Soybean	extracellular, vacuole	32.13	54.83
KRH06775	Soybean	endoplasmic reticulum	41.63	53.33
GSMUA_Achr10P...	Banana	cytosol	23.76	52.76
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	22.62	51.81
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	22.85	51.27
GSMUA_Achr7P16430_001	Banana	cytosol	24.21	50.23
GSMUA_Achr3P05220_001	Banana	cytosol	23.3	49.52
GSMUA_Achr5P21880_001	Banana	cytosol	23.76	49.3
GSMUA_Achr9P13820_001	Banana	cytosol	23.08	48.8
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	23.08	48.34
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	28.73	45.2
GSMUA_Achr10P...	Banana	extracellular	29.41	45.14
GSMUA_Achr10P...	Banana	extracellular	28.51	44.68
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	27.15	44.44
GSMUA_Achr6P30850_001	Banana	extracellular	28.28	44.33
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	26.7	44.19
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	29.41	44.07
GSMUA_Achr8P05120_001	Banana	extracellular	28.51	44.06
GSMUA_Achr8P26470_001	Banana	extracellular	28.28	43.71
GSMUA_Achr3P26220_001	Banana	extracellular	28.28	43.71
GSMUA_Achr1P08500_001	Banana	extracellular	26.24	42.8
GSMUA_Achr5P19320_001	Banana	vacuole	26.24	40.85
GSMUA_Achr1P14290_001	Banana	vacuole	26.92	40.2
GSMUA_Achr8P19740_001	Banana	extracellular	24.21	39.78
GSMUA_Achr3P03390_001	Banana	extracellular	24.66	37.07
GSMUA_Achr7P10940_001	Banana	extracellular	23.3	37.05

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G02620_001	EnsemblPlants:GSMUA_Achr7P02620_001
EnsemblPlants:GSMUA_Achr7T02620_001	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR000757	InterPro:IPR006121	UniProt:M0TE52
PFAM:PF00722	ScanProsite:PS01034	PFscan:PS50846	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF97
SUPFAM:SSF49899	SUPFAM:SSF55008	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002949F02	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G02620_001]

Coordinates

chr7:-:2083560..2087776

Molecular Weight (calculated)

49079.1 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.506

Length

442 amino acids

Sequence
(BLAST)

001: MASFASSAVI VFLVLGLVSV TTLAGTPRRP IDVPFQKNYV PTWAYDHIKY FDGGREVQLS LDKNTGTGFQ SGGSYLFGHF SMQIKMVPGD SAGTVTAFYL
101: SSQNSEHDEI DFEFLGNRTN QPYILQTNVF TGGKGDREQR IYLWFDPTKD YHSYSVLWNM YQIVFYVDDV PIRVFKNSKD LGVRYPFNQP MKIYSSLWNG
201: DDWATRGGLE KTDWSKAPFR VELKVSVNCC EGCRRKVLKA LSIKGVLRAE IHPTLPKVTV VGNVDVRILI KKLSKVGKSA EVLPDKTQKP QGEEKRSEES
301: GKKSEKSNTE EDKGGRGSEK PKPEEEKSKS STNGSDSNKA QGSEKEAGDD AKTTAAPEAA KSLNPTTVTT FPPVSFMMNP RVAQAPVYYY PMEPVAVPIP
401: YYAMTALPAP APYRPPPAPL QSQATAFGDY FNEDNTVGCR IM

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.