Factsheet for PGSC0003DMT400005591

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g040140.1.1	Tomato	extracellular	97.3	96.0
GSMUA_Achr8P34300_001	Banana	cytosol	72.3	78.1
KRG94750	Soybean	endoplasmic reticulum	74.66	74.92
KRH06776	Soybean	endoplasmic reticulum	74.32	74.58
AT2G06850.1	Thale cress	extracellular	72.3	72.3
CDY69237	Canola	extracellular	71.96	72.2
Bra013164.1-P	Field mustard	extracellular	71.62	71.86
CDX93096	Canola	extracellular	71.62	71.86
KRH70105	Soybean	nucleus	75.0	71.84
TraesCS4A01G172600.1	Wheat	unclear	70.95	71.43
TraesCSU01G175000.1	Wheat	vacuole	70.61	71.09
TraesCS4D01G142800.1	Wheat	extracellular	70.61	71.09
Os11t0539200-01	Rice	extracellular	68.58	68.81
Zm00001d052651_P001	Maize	extracellular	68.92	68.69
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	69.93	68.54
KRG94748	Soybean	extracellular, vacuole	59.46	67.95
OQU83588	Sorghum	extracellular	69.26	67.66
PGSC0003DMT400028324	Potato	vacuole	66.89	67.12
PGSC0003DMT400063689	Potato	vacuole	65.2	65.2
KRH06775	Soybean	endoplasmic reticulum	75.0	64.35
PGSC0003DMT400011902	Potato	extracellular	48.99	51.97
PGSC0003DMT400056316	Potato	extracellular	48.31	51.81
PGSC0003DMT400048242	Potato	extracellular	47.64	50.54
PGSC0003DMT400055138	Potato	extracellular	50.0	50.17
PGSC0003DMT400036329	Potato	extracellular	47.3	49.65
PGSC0003DMT400048241	Potato	extracellular	47.64	49.47
PGSC0003DMT400067358	Potato	extracellular	49.32	49.32
PGSC0003DMT400005949	Potato	cytosol	32.09	48.97
PGSC0003DMT400044559	Potato	extracellular	47.64	48.62
PGSC0003DMT400020314	Potato	cytosol, nucleus, peroxisome	44.93	48.54
PGSC0003DMT400038413	Potato	extracellular	46.62	48.25
PGSC0003DMT400079856	Potato	extracellular	46.62	48.08
PGSC0003DMT400026398	Potato	extracellular	45.95	48.06
PGSC0003DMT400044562	Potato	extracellular	45.95	47.39
PGSC0003DMT400020122	Potato	extracellular	45.27	46.21
PGSC0003DMT400061841	Potato	extracellular	45.95	46.1
PGSC0003DMT400013128	Potato	extracellular	24.66	45.62
PGSC0003DMT400005342	Potato	extracellular	44.93	44.63
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	58.45	39.14
PGSC0003DMT400048240	Potato	golgi	44.93	38.89

Protein Annotations

EntrezGene:102594633	Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605
GO:GO:0009612	GO:GO:0009628	GO:GO:0009645	GO:GO:0009653	GO:GO:0009719	GO:GO:0009733
GO:GO:0009826	GO:GO:0009987	GO:GO:0010411	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0040007
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:M0ZQ51	PFAM:PF00722
PFAM:PF06955	EnsemblPlantsGene:PGSC0003DMG400002188	PGSC:PGSC0003DMG400002188	EnsemblPlants:PGSC0003DMT400005591	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI000294E604
InterPro:XET_C	RefSeq:XP_006343507.2	InterPro:XTH	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400002188]

Coordinates

chr11:-:18760292..18763405

Molecular Weight (calculated)

34387.7 Da

IEP (calculated)

8.415

GRAVY (calculated)

-0.567

Length

296 amino acids

Sequence
(BLAST)

001: MGFKWMMMLV LCVLIGGSMG AKPNKPIDVP FGRNYEPSWA FDHIKYLNGG SEIQLSLDNR TGTGFQSKGS YLFGHFAMHI KMVAGDSAGT VTAFYLSSQN
101: SEHDEIDFEF LGNKTGEPYI LQTNVYTGGK GDKEQRIYLW FDPTKDYHTY SVLWNLYQIV FFVDEYPIRV FKNNKNLGIK FPFDQPMKIY SSLWEADDWA
201: TRGGLEKIDW SNAPFVASYK GFHIDGCESS VNAKFCANQG KSWWDQKEFQ DLDTTQWRLL RRVRDKYTIY NYCTDKKRFS TMPKECKRNR DVPRNS

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.