Factsheet for Bra040716.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71167	Canola	vacuole	98.65	98.65
AT2G14620.1	Thale cress	vacuole	87.21	86.62
VIT_03s0088g00650.t01	Wine grape	extracellular, vacuole	69.02	69.49
GSMUA_Achr1P14290_001	Banana	vacuole	68.69	68.92
KRH35625	Soybean	vacuole	68.35	68.58
KRG91154	Soybean	extracellular	68.01	68.24
Solyc01g106650.2.1	Tomato	extracellular, vacuole	63.3	64.16
PGSC0003DMT400013128	Potato	extracellular	34.01	63.12
Bra024415.1-P	Field mustard	extracellular	45.12	47.02
Bra017855.1-P	Field mustard	extracellular, vacuole	46.13	46.92
Bra002723.1-P	Field mustard	extracellular	44.44	46.15
Bra020436.1-P	Field mustard	extracellular	43.77	45.94
Bra013923.1-P	Field mustard	extracellular	42.76	44.72
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	41.75	44.44
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	35.69	44.35
Bra020432.1-P	Field mustard	extracellular	42.09	44.17
Bra000840.1-P	Field mustard	extracellular	43.1	44.14
Bra006220.1-P	Field mustard	vacuole	43.43	44.03
Bra019141.1-P	Field mustard	extracellular	42.09	43.71
Bra019846.1-P	Field mustard	extracellular	43.43	43.14
Bra011179.1-P	Field mustard	extracellular	40.74	42.91
Bra020434.1-P	Field mustard	extracellular	41.08	42.81
Bra002722.1-P	Field mustard	extracellular	40.74	42.61
Bra002719.1-P	Field mustard	extracellular	40.4	42.4
Bra013164.1-P	Field mustard	extracellular	42.09	42.37
Bra014975.1-P	Field mustard	extracellular, vacuole	41.41	42.27
Bra024089.1-P	Field mustard	extracellular	39.39	41.94
Bra013922.1-P	Field mustard	extracellular	40.4	41.81
Bra008806.1-P	Field mustard	extracellular	40.4	41.81
Bra038442.1-P	Field mustard	extracellular	40.07	41.18
Bra011066.1-P	Field mustard	extracellular	40.07	40.75
Bra006814.1-P	Field mustard	extracellular	43.43	40.44
Bra020433.1-P	Field mustard	extracellular	34.68	39.62
Bra034193.1-P	Field mustard	cytosol	41.75	36.05

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra040716	EnsemblPlants:Bra040716.1	EnsemblPlants:Bra040716.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757
UniProt:M4FHY7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF37	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI000253E7DD	InterPro:XET_C	InterPro:XTH
SEG:seg	:	:	:	:	:

Description

AT2G14620 (E=7e-143) | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative

Coordinates

chrScaffold000239:-:14259..15844

Molecular Weight (calculated)

34493.7 Da

IEP (calculated)

8.289

GRAVY (calculated)

-0.449

Length

297 amino acids

Sequence
(BLAST)

001: MTSVKRSKSF VLLIYLISSL LLRVSEASVV SSGDFNKDFL VTWSPTHVNT SSDGRSRTLK LDQESGASFS SIQTFLFGKI DMKIKLIPGP SQGTVVAYYM
101: SSDQTNRDEI DFEFLGNVNG QPYILQTNIY ADGVDNREER IHLWFDPTKD FHTYSILWNV HQIVFMVDQI PIRLYRNHSE KGVAYPRLQP MSIKVSLWNG
201: ESWATSGGHE KVDWSKAPFV ASFGDYKIDA CIWKGNPTLC NEENNENWWN KNEFSSLTRV QKRWFKWVSK YHLIYDYCQD YARFHNKLPK ECSLPKY

Best Arabidopsis Sequence Match ( AT2G14620.1 )
(BLAST)

001: MTLINRSKPF VLLVGFSIIS SLLLWVSQAS VVSSGDFNKD FFVTWSPTHV NTSNDGRSRT LKLDQESGAS FSSIQTFLFG QIDMKIKLIR GSSQGTVVAY
101: YMSSDQPNRD EIDFEFLGNV NGQPYILQTN VYAEGLDNRE ERIHLWFDPA KDFHTYSILW NIHQIVFMVD QIPIRLYRNH GEKGVAYPRL QPMSVQASLW
201: NGESWATRGG HDKIDWSKGP FVASFGDYKI DACIWIGNTS FCNGESTENW WNKNEFSSLT RVQKRWFKWV RKYHLIYDYC QDYGRFNNKL PKECSLPKY

Arabidopsis Description

XTH10Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVK1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.