Factsheet for VIT_03s0088g00650.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35625	Soybean	vacuole	82.37	82.09
KRG91154	Soybean	extracellular	81.36	81.08
GSMUA_Achr1P14290_001	Banana	vacuole	71.86	71.62
AT2G14620.1	Thale cress	vacuole	71.53	70.57
Bra040716.1-P	Field mustard	vacuole	69.49	69.02
CDX71167	Canola	vacuole	69.15	68.69
Solyc01g106650.2.1	Tomato	extracellular, vacuole	66.44	66.89
PGSC0003DMT400013128	Potato	extracellular	35.59	65.62
VIT_11s0052g01330.t01	Wine grape	extracellular, vacuole	44.07	49.62
VIT_17s0053g00610.t01	Wine grape	cytosol	36.27	49.54
VIT_11s0052g01220.t01	Wine grape	extracellular	47.46	49.12
VIT_05s0062g00480.t01	Wine grape	cytosol	43.73	48.68
VIT_05s0062g00610.t01	Wine grape	cytosol	43.73	48.68
VIT_05s0062g00250.t01	Wine grape	extracellular	45.76	48.39
VIT_11s0052g01270.t01	Wine grape	extracellular	48.47	48.15
VIT_10s0003g02440.t01	Wine grape	extracellular	44.41	47.99
VIT_11s0052g01310.t01	Wine grape	extracellular	43.39	47.58
VIT_11s0052g01320.t01	Wine grape	extracellular	47.46	47.3
VIT_11s0052g01200.t01	Wine grape	extracellular	47.12	46.8
VIT_11s0052g01250.t01	Wine grape	extracellular	45.76	46.71
VIT_11s0052g01280.t01	Wine grape	endoplasmic reticulum, extracellular	46.78	46.62
VIT_05s0062g00240.t01	Wine grape	extracellular	44.41	46.62
VIT_11s0052g01340.t01	Wine grape	extracellular	42.71	46.32
VIT_11s0052g01300.t01	Wine grape	extracellular	46.44	46.28
VIT_11s0052g01260.t01	Wine grape	endoplasmic reticulum, extracellular	45.76	45.61
VIT_11s0016g03480.t01	Wine grape	extracellular	44.41	45.02
VIT_01s0150g00460.t01	Wine grape	extracellular	45.76	43.97
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	43.73	43.0
VIT_11s0052g01180.t01	Wine grape	cytosol	46.78	42.99
VIT_12s0134g00160.t01	Wine grape	extracellular	43.05	42.91
VIT_11s0052g01230.t01	Wine grape	cytosol	40.0	42.45
VIT_11s0052g01190.t01	Wine grape	vacuole	47.46	37.94
VIT_11s0052g01210.t01	Wine grape	extracellular, plastid	46.1	8.59

Protein Annotations

EntrezGene:100261688	wikigene:100261688	Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:AM482625	ProteinID:CAN70891
ProteinID:CAN70891.1	ProteinID:CCB49623	ProteinID:CCB49623.1	InterPro:ConA-like_dom_sf	UniProt:F6HBP1	EMBL:FN595512
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	EntrezGene:LOC100261688	wikigene:LOC100261688	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF37	SUPFAM:SSF49899	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00015CBF51	ArrayExpress:VIT_03s0088g00650	EnsemblPlantsGene:VIT_03s0088g00650	EnsemblPlants:VIT_03s0088g00650.t01	unigene:Vvi.22495
InterPro:XET_C	RefSeq:XP_002270633	RefSeq:XP_002270633.1	InterPro:XTH	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6HBP1]

Coordinates

chr3:+:8842942..8844322

Molecular Weight (calculated)

34403.5 Da

IEP (calculated)

7.633

GRAVY (calculated)

-0.372

Length

295 amino acids

Sequence
(BLAST)

001: MNDYHKLVFF IGVLTLISLV QVSDASVVST GDFNKDFFVI WSPSHVNTSA DGHARSLKLD KESGAGFASN QLFLFGQIDM QIKLVTGHSA GTVVAYYLTS
101: DQPNRDEVDF EFLGNVSGQP YILQTNVFAD GFDNREERIY LWFDPTEDFH TYSILWNLHQ IVFMVDWVPI RVYRNHADKG VAFPRWQPMS IKISLWNGDS
201: WATRGGKDKI DWTKGPFIAS FRNYKLDACI WRGNARFCRA DSPTNWWNKE RFSSLTSTQR RLFKWVRTHH LIYDYCQDNE RFQNNLPKEC FLPKY

Best Arabidopsis Sequence Match ( AT2G14620.1 )
(BLAST)

001: MTLINRSKPF VLLVGFSIIS SLLLWVSQAS VVSSGDFNKD FFVTWSPTHV NTSNDGRSRT LKLDQESGAS FSSIQTFLFG QIDMKIKLIR GSSQGTVVAY
101: YMSSDQPNRD EIDFEFLGNV NGQPYILQTN VYAEGLDNRE ERIHLWFDPA KDFHTYSILW NIHQIVFMVD QIPIRLYRNH GEKGVAYPRL QPMSVQASLW
201: NGESWATRGG HDKIDWSKGP FVASFGDYKI DACIWIGNTS FCNGESTENW WNKNEFSSLT RVQKRWFKWV RKYHLIYDYC QDYGRFNNKL PKECSLPKY

Arabidopsis Description

XTH10Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVK1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.